LOCUS BC002469 2055 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 56, mRNA (cDNA clone
MGC:1029 IMAGE:3347975), complete cds.
ACCESSION BC002469
VERSION BC002469.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2055)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2055)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002469.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147608.
FEATURES Location/Qualifiers
source 1..2055
/db_xref="H-InvDB:HIT000030917"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1029 IMAGE:3347975"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2055
/gene="C1orf56"
/gene_synonym="FLJ20519"
/gene_synonym="RP11-316M1.9"
/db_xref="GeneID:54964"
/db_xref="HGNC:HGNC:26045"
CDS 66..1091
/gene="C1orf56"
/gene_synonym="FLJ20519"
/gene_synonym="RP11-316M1.9"
/codon_start=1
/product="chromosome 1 open reading frame 56"
/protein_id="AAH02469.1"
/db_xref="GeneID:54964"
/db_xref="HGNC:HGNC:26045"
/translation="MVPAAGALLWVLLLNLGPRAAGAQGLTQTPTEMQRVSLRFGGPM
TRSYRSTARTGLPRKTRIILEDENDAMADADRLAGPAAAELLAATVSTGFSRSSAINE
EDGSSEEGVVINAGKDSTSRELPSATPNTAGSSSTRFIANSQEPEIRLTSSLPRSPGR
STEDLPGSQATLSQWSTPGSTPSRWPSPSPTAMPSPEDLRLVLMPWGPWHCHCKSGTM
SRSRSGKLHGLSGRLRVGALSQLRTEHKPCTYQQCPCNRLREECPLDTSLCTDTNCAS
QSTTSTRTTTTPFPTIHLRSSPSLPPASPCPALAFWKRVRIGLEDIWNSLSSVFTEMQ
PIDRNQR"
BASE COUNT 547 a 569 c 485 g 454 t
ORIGIN
1 ggagcgaagg taggaggcag ggcttgcctc actggccacc ctcccaaccc caagagccca
61 gccccatggt ccccgccgcc ggcgcgctgc tgtgggtcct gctgctgaat ctgggtcccc
121 gggcggcggg ggcccaaggc ctgacccaga ctccgaccga aatgcagcgg gtcagtttac
181 gctttggggg ccccatgacc cgcagctacc ggagcaccgc ccggactggt cttccccgga
241 agacaaggat aatcctagag gacgagaatg atgccatggc cgacgccgac cgcctggctg
301 gaccagcggc tgccgagctc ttggccgcca cggtgtccac cggctttagc cggtcgtccg
361 ccattaacga ggaggatggg tcttcagaag agggggttgt gattaatgcc ggaaaggata
421 gcaccagcag agagcttccc agtgcgactc ccaatacagc ggggagttcc agcacgaggt
481 ttatagccaa tagtcaggag cctgaaatca ggctgacttc aagcctgccg cgctcccccg
541 ggaggtctac tgaggacctg ccaggctcgc aggccaccct gagccagtgg tccacacctg
601 ggtctacccc gagccggtgg ccgtcaccct cacccacagc catgccatct cctgaggatc
661 tgcggctggt gctgatgccc tggggcccgt ggcactgcca ctgcaagtcg ggcaccatga
721 gccggagccg gtctgggaag ctgcacggcc tttccgggcg ccttcgagtt ggggcgctga
781 gccagctccg cacggagcac aagccttgca cctatcaaca atgtccctgc aaccgacttc
841 gggaagagtg ccccctggac acaagtctct gtactgacac caactgtgcc tctcagagca
901 ccaccagtac caggaccacc actaccccct tccccaccat ccacctcaga agcagtccca
961 gcctgccacc cgccagcccc tgcccagccc tggctttttg gaaacgggtc aggattggcc
1021 tggaggatat ttggaatagc ctctcttcag tgttcacaga gatgcaacca atagacagaa
1081 accagaggta atggccactt catccacatg aggagatgtc agtatctcaa cctctcttgc
1141 cctttcaatc ctagcaccca ctagatattt ttagtacaga aaaacaaaac tggaaaacac
1201 attgtttggt cttgtgtttc tttacagagg tacctgaggg aggagagaca taaatccctt
1261 catccctaag actgaactat gtaactagca gcctctggct tgttttctac tccctgtccc
1321 tcaggataaa atgttgatat tgctcatttt cctcatttcc aacattgttt taaaacaagt
1381 acttctttta caggcttgaa aaatctcaaa taaacgctaa gaaaagggag taggaagaac
1441 aaggagttga gcccttgaaa gatgacagtg gtcttcttgc cttcatgctt ggccctctct
1501 cctcaaaagg gcaatgttgg tacaaaattc catctcagcc actttcgagg agttatcttc
1561 attagctata tccatccttt aatccaacac acacctgcaa tgattactgt gcaactattt
1621 tgcttaattt tttatttgaa aaaatgtatt taaaagtcca acaacttttt aatataaatt
1681 acgactctca aacccattcc catcacttta ttagtgatgg tagcatacat attagagaag
1741 gtagctaaag gcaagagagc accaaaggaa aaagactgtc caaagaacag gtattagaat
1801 gaggccgaag atcacggtga ccagagattt ctaggagtct ctaacctttc caccctatcc
1861 tgttaaccct ttagatctct agtataacac tcaggctact gaggtatttt agagcaacaa
1921 gctgggttac tttcagagca accagcttga ctggaactga gagtaaattg ggaatgtatg
1981 accaatctta gaccctgaaa aatggcagaa aatacatgga aatttgaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaa
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