LOCUS BC002403 2212 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lectin, galactoside-binding, soluble, 3 binding
protein, mRNA (cDNA clone MGC:8513 IMAGE:2822371), complete cds.
ACCESSION BC002403
VERSION BC002403.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2212)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2212)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002403.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6006016.
FEATURES Location/Qualifiers
source 1..2212
/db_xref="H-InvDB:HIT000030866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8513 IMAGE:2822371"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2212
/gene="LGALS3BP"
/gene_synonym="90K"
/gene_synonym="MAC-2-BP"
/db_xref="GeneID:3959"
/db_xref="HGNC:HGNC:6564"
/db_xref="MIM:600626"
CDS 113..1870
/gene="LGALS3BP"
/gene_synonym="90K"
/gene_synonym="MAC-2-BP"
/codon_start=1
/product="lectin, galactoside-binding, soluble, 3 binding
protein"
/protein_id="AAH02403.1"
/db_xref="GeneID:3959"
/db_xref="HGNC:HGNC:6564"
/db_xref="MIM:600626"
/translation="MTPPRLFWVWLLVAGTQGVNDGDMRLADGGATNQGRVEIFYRGQ
WGTVCDNLWDLTDASVVCRALGFENATQALGRAAFGQGSGPIMLDEVQCTGTEASLAD
CKSLGWLKSNCRHERDAGVVCTNETRSTHTLDLSRELSEALGQIFDSQRGCDLSISVN
VQGEDALGFCGHTVILTANLEAQALWKEPGSNVTMSVDAECVPMVRDLLRYFYSRRID
ITLSSVKCFHKLASAYGARQLQGYCASLFAILLPQDPSFQMPLDLYAYAVATGDALLE
KLCLQFLAWNFEALTQAEAWPSVPTDLLQLLLPRSDLAVPSELALLKAVDTWSWGERA
SHEEVEGLVEKIRFPMMLPEELFELQFNLSLYWSHEALFQKKTLQALEFHTVPFQLLA
RYKGLNLTEDTYKPRIYTSPTWSAFVTDSSWSARKSQLVYQSRRGPLVKYSSDYFQAP
SDYRYYPYQSFQTPQHPSFLFQDKRVSWSLVYLPTIQSCWNYGFSCSSDELPVLGLTK
SGGSDRTIAYENKALMLCEGLFVADVTDFEGWKAAIPSALDTNSSKSTSSFPCPAGHF
NGFRTVIRPFYLTNSSGVD"
BASE COUNT 441 a 721 c 621 g 429 t
ORIGIN
1 ggcttctggg tcaaaggacc agtctgcaga gggatcctgt ggctggaagc gaggaggctc
61 cacacggccg ttgcagctac cgcagccagg atctgggcat ccaggcacgg ccatgacccc
121 tccgaggctc ttctgggtgt ggctgctggt tgcaggaacc caaggcgtga acgatggtga
181 catgcggctg gccgatgggg gcgccaccaa ccagggccgc gtggagatct tctacagagg
241 ccagtggggc actgtgtgtg acaacctgtg ggacctgact gatgccagcg tcgtctgccg
301 ggccctgggc ttcgagaacg ccacccaggc tctgggcaga gctgccttcg ggcaaggatc
361 aggccccatc atgctggatg aggtccagtg cacgggaacc gaggcctcac tggccgactg
421 caagtccctg ggctggctga agagcaactg caggcacgag agagacgctg gtgtggtctg
481 caccaatgaa accaggagca cccacaccct ggacctctcc agggagctct cggaggccct
541 tggccagatc tttgacagcc agcggggctg cgacctgtcc atcagcgtga atgtgcaggg
601 cgaggacgcc ctgggcttct gtggccacac ggtcatcctg actgccaacc tggaggccca
661 ggccctgtgg aaggagccgg gcagcaatgt caccatgagt gtggatgctg agtgtgtgcc
721 catggtcagg gaccttctca ggtacttcta ctcccgaagg attgacatca ccctgtcgtc
781 agtcaagtgc ttccacaagc tggcctctgc ctatggggcc aggcagctgc agggctactg
841 cgcaagcctc tttgccatcc tcctccccca ggacccctcg ttccagatgc ccctggacct
901 gtatgcctat gcagtggcca caggggacgc cctgctggag aagctctgcc tacagttcct
961 ggcctggaac ttcgaggcct tgacgcaggc cgaggcctgg cccagtgtcc ccacagacct
1021 gctccaactg ctgctgccca ggagcgacct ggcggtgccc agcgagctgg ccctactgaa
1081 ggccgtggac acctggagct ggggggagcg tgcctcccat gaggaggtgg agggcttggt
1141 ggagaagatc cgcttcccca tgatgctccc tgaggagctc tttgagctgc agttcaacct
1201 gtccctgtac tggagccacg aggccctgtt ccagaagaag actctgcagg ccctggaatt
1261 ccacactgtg cccttccagt tgctggcccg gtacaaaggc ctgaacctca ccgaggatac
1321 ctacaagccc cggatttaca cctcgcccac ctggagtgcc tttgtgacag acagttcctg
1381 gagtgcacgg aagtcacaac tggtctatca gtccagacgg gggcctttgg tcaaatattc
1441 ttctgattac ttccaagccc cctctgacta cagatactac ccctaccagt ccttccagac
1501 tccacaacac cccagcttcc tcttccagga caagagggtg tcctggtccc tggtctacct
1561 ccccaccatc cagagctgct ggaactacgg cttctcctgc tcctcggacg agctccctgt
1621 cctgggcctc accaagtctg gcggctcaga tcgcaccatt gcctacgaaa acaaagccct
1681 gatgctctgc gaagggctct tcgtggcaga cgtcaccgat ttcgagggct ggaaggctgc
1741 gattcccagt gccctggaca ccaacagctc gaagagcacc tcctccttcc cctgcccggc
1801 agggcacttc aacggcttcc gcacggtcat ccgccccttc tacctgacca actcctcagg
1861 tgtggactag acggcgtggc ccaagggtgg tgagaaccgg agaaccccag gacgccctca
1921 ctgcaggctc ccctcctcgg cttccttcct ctctgcaatg accttcaaca accggccacc
1981 agatgtcgcc ctactcacct gagcgctcag cttcaagaaa ttactggaag gcttccacta
2041 gggtccacca ggagttctcc caccacctca ccagtttcca ggtggtaagc accaggacgc
2101 cctcgaggtt gctctgggat ccccccacag cccctggtca gtctgccctt gtcactggtc
2161 tgaggtcatt aaaattacat tgaggttcct aaaaaaaaaa aaaaaaaaaa aa
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