LOCUS BC002360 3332 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens elongation factor Tu GTP binding domain containing 2,
mRNA (cDNA clone MGC:8581 IMAGE:2960986), complete cds.
ACCESSION BC002360
VERSION BC002360.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3332)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3332)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002360.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: k Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41152055.
FEATURES Location/Qualifiers
source 1..3332
/db_xref="H-InvDB:HIT000030827"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8581 IMAGE:2960986"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3332
/gene="EFTUD2"
/gene_synonym="KIAA0031"
/gene_synonym="Snrp116"
/gene_synonym="Snu114"
/gene_synonym="U5-116KD"
/db_xref="GeneID:9343"
/db_xref="HGNC:HGNC:30858"
/db_xref="MIM:603892"
CDS 32..2950
/gene="EFTUD2"
/gene_synonym="KIAA0031"
/gene_synonym="Snrp116"
/gene_synonym="Snu114"
/gene_synonym="U5-116KD"
/codon_start=1
/product="elongation factor Tu GTP binding domain
containing 2"
/protein_id="AAH02360.1"
/db_xref="GeneID:9343"
/db_xref="HGNC:HGNC:30858"
/db_xref="MIM:603892"
/translation="MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDD
VGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKF
TLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKR
YDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAG
LRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYY
KLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLVSFAKIYADTFGDI
NYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSL
PRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIE
HTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVK
VLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATIT
EPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEES
GEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK
NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDAT
GPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQ
EPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGH
VTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDK
SIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
"
BASE COUNT 825 a 833 c 885 g 789 t
ORIGIN
1 gggaactctt agctgagcag gcgagagcat catggatacc gacttatatg atgagtttgg
61 gaattatatt ggaccagagc ttgattctga tgaagatgat gatgaattgg gtagagagac
121 caaagatctt gatgagatgg atgatgatga cgacgacgat gacgtaggag atcatgacga
181 tgaccaccct gggatggagg tggtgctgca tgaggacaag aagtactacc caacagccga
241 ggaggtgtat ggtcctgagg tggagaccat agttcaagag gaagacactc agcctctcac
301 agaacccatt attaagccag tgaaaaccaa gaaattcact ctgatggagc agacattacc
361 tgttacggtg tatgagatgg atttcttggc ggatctgatg gataactcag agctcatcag
421 aaatgtgacc ctttgtggac atctccacca tggcaagaca tgttttgtgg attgtttaat
481 tgaacagact cacccggaaa tcagaaagcg ctatgaccaa gatctgtgct atactgacat
541 cctcttcaca gagcaagaga gaggtgtagg catcaaaagc actcctgtga cagtggtctt
601 gccagacacc aaaggaaaat cttatctctt caatatcatg gacactccag gacatgtgaa
661 tttctctgat gaggtcacag ctggcttgcg catctcagat ggagtggtcc ttttcattga
721 tgctgctgag ggggtgatgc tgaacacaga gcggctgatc aagcatgcgg tgcaggagag
781 gctggcagtc actgtgtgca tcaacaagat tgaccggctg atcctggagc tgaagctgcc
841 tccaactgat gcttattaca agctgcgcca cattgtggat gaggtcaatg gattaataag
901 catgtattcc actgatgaga acctgatcct ttccccactc ctgggtaacg tctgcttctc
961 cagctcccag tacagcatct gcttcacgct ggtctccttt gccaagatct atgccgacac
1021 ctttggtgac attaattacc aagaatttgc taaaagactc tggggtgaca tctacttcaa
1081 ccctaagacg cgaaagttca ccaaaaaggc cccaactagc agctcccaga gaagtttcgt
1141 ggagtttatc ttggagcctc tttataagat cctcgcccag gttgtaggtg acgtggacac
1201 cagcctccca cggaccctag acgagcttgg catccacctg acgaaggagg agctgaagct
1261 gaacatccgc cccttgctca ggctggtctg caaaaagttc tttggcgagt tcacaggctt
1321 tgtggacatg tgtgtgcagc atatcccttc tccaaaggtg ggcgccaagc ccaagattga
1381 gcacacctac accggtggtg tggactccga cctcggcgag gctatgagtg actgtgaccc
1441 tgatggcccc ctgatgtgcc acactactaa gatgtacagc acagatgatg gagtccagtt
1501 tcacgccttt ggccgggtgc tgagtggcac cattcatgct gggcagcctg tgaaggtact
1561 gggggagaac tacaccctgg aggatgagga agactcccag atatgcaccg tgggccgcct
1621 ttggatctct gtggccaggt accacatcga ggtgaaccgt gttcctgctg gcaactgggt
1681 tctgattgaa ggtgttgatc aaccaattgt gaagacagca accataaccg aaccccgagg
1741 caatgaggag gctcagattt tccgaccctt gaagttcaat accacatctg ttatcaagat
1801 tgctgtggag ccagtcaacc cctcagagct gcccaagatg cttgatggcc tgcgcaaggt
1861 caacaagagc tatccatccc tcaccaccaa ggtggaggag tctggcgagc atgtgatcct
1921 gggcactggg gagctctacc tggactgtgt gatgcatgat ttgcggaaga tgtactcaga
1981 gatagacatc aaggtggctg acccagttgt cacgttttgt gagacggtgg tggaaacatc
2041 ctccctcaag tgctttgctg aaacgcctaa taagaagaac aagatcacca tgattgctga
2101 gcctcttgag aagggcctgg cagaggacat agagaatgag gtggtccaga ttacgtggaa
2161 caggaagaag ctgggagagt tcttccagac caagtacgat tgggatctgc tggctgcccg
2221 ttccatctgg gcttttggcc ctgatgcgac tggccccaac attctggtgg atgatactct
2281 gccctctgag gtggacaagg ctcttcttgg ttcagtgaag gacagcatcg ttcaaggttt
2341 ccagtgggga accagggagg gccccctctg tgatgaattg attcggaatg tcaagtttaa
2401 gatcctggat gcggtggttg cccaggagcc cctgcaccgg ggcgggggcc agatcatccc
2461 cacagccagg agagtcgtct actctgcctt cctcatggct actcctcgtc tgatggagcc
2521 ttactacttt gtagaggtcc aggcccctgc agattgcgtc tctgcagttt ataccgtcct
2581 ggccaggcgc agggggcacg tgactcagga tgcacccatc ccaggctccc ctctgtacac
2641 catcaaagct tttatcccgg ccatcgactc ttttggcttt gagactgatc tccggactca
2701 cacccaggga caagcctttt ctctgtctgt cttccaccac tggcagattg tgcctggtga
2761 tcccctggac aagagcattg tcatccgccc cttggagcca cagccagctc ctcacctggc
2821 ccgggaattc atgatcaaaa cccgccgtag gaagggcctc agtgaagatg tgagcatcag
2881 caaattcttc gatgatccta tgttgctgga acttgccaaa caggatgttg tgctcaatta
2941 ccccatgtga gtgcgtggac tcctgggagc tcctgctccc tacagtgggc tgcaactcct
3001 gtacttgaag ctgagacctc atatgacgtg gccttcgtgt tgtcagagag tgtctggaag
3061 ctgctgttgc catcttgaac aactcaccaa cctccaaccc agagccccag tgagagagga
3121 gcatttggcc tcctgcttcc ttctgtggcc tctgccgggc tccattccca aggaaaagag
3181 aggagcttgg gctcacagaa agagaagggg atgaaacccc aaggggccct atctttggga
3241 tttacatgga attttatttt ctacaagttt gaccttagcc atggtttgca agtgaacaga
3301 acattctgac ctcaaaaaaa aaaaaaaaaa aa
//