LOCUS BC002360 3332 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens elongation factor Tu GTP binding domain containing 2, mRNA (cDNA clone MGC:8581 IMAGE:2960986), complete cds. ACCESSION BC002360 VERSION BC002360.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3332) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3332) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC002360.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: k Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41152055. FEATURES Location/Qualifiers source 1..3332 /db_xref="H-InvDB:HIT000030827" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8581 IMAGE:2960986" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3332 /gene="EFTUD2" /gene_synonym="KIAA0031" /gene_synonym="Snrp116" /gene_synonym="Snu114" /gene_synonym="U5-116KD" /db_xref="GeneID:9343" /db_xref="HGNC:HGNC:30858" /db_xref="MIM:603892" CDS 32..2950 /gene="EFTUD2" /gene_synonym="KIAA0031" /gene_synonym="Snrp116" /gene_synonym="Snu114" /gene_synonym="U5-116KD" /codon_start=1 /product="elongation factor Tu GTP binding domain containing 2" /protein_id="AAH02360.1" /db_xref="GeneID:9343" /db_xref="HGNC:HGNC:30858" /db_xref="MIM:603892" /translation="MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDD VGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKF TLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKR YDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAG LRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYY KLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLVSFAKIYADTFGDI NYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSL PRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIE HTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVK VLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATIT EPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEES GEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDAT GPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQ EPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGH VTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDK SIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM " BASE COUNT 825 a 833 c 885 g 789 t ORIGIN 1 gggaactctt agctgagcag gcgagagcat catggatacc gacttatatg atgagtttgg 61 gaattatatt ggaccagagc ttgattctga tgaagatgat gatgaattgg gtagagagac 121 caaagatctt gatgagatgg atgatgatga cgacgacgat gacgtaggag atcatgacga 181 tgaccaccct gggatggagg tggtgctgca tgaggacaag aagtactacc caacagccga 241 ggaggtgtat ggtcctgagg tggagaccat agttcaagag gaagacactc agcctctcac 301 agaacccatt attaagccag tgaaaaccaa gaaattcact ctgatggagc agacattacc 361 tgttacggtg tatgagatgg atttcttggc ggatctgatg gataactcag agctcatcag 421 aaatgtgacc ctttgtggac atctccacca tggcaagaca tgttttgtgg attgtttaat 481 tgaacagact cacccggaaa tcagaaagcg ctatgaccaa gatctgtgct atactgacat 541 cctcttcaca gagcaagaga gaggtgtagg catcaaaagc actcctgtga cagtggtctt 601 gccagacacc aaaggaaaat cttatctctt caatatcatg gacactccag gacatgtgaa 661 tttctctgat gaggtcacag ctggcttgcg catctcagat ggagtggtcc ttttcattga 721 tgctgctgag ggggtgatgc tgaacacaga gcggctgatc aagcatgcgg tgcaggagag 781 gctggcagtc actgtgtgca tcaacaagat tgaccggctg atcctggagc tgaagctgcc 841 tccaactgat gcttattaca agctgcgcca cattgtggat gaggtcaatg gattaataag 901 catgtattcc actgatgaga acctgatcct ttccccactc ctgggtaacg tctgcttctc 961 cagctcccag tacagcatct gcttcacgct ggtctccttt gccaagatct atgccgacac 1021 ctttggtgac attaattacc aagaatttgc taaaagactc tggggtgaca tctacttcaa 1081 ccctaagacg cgaaagttca ccaaaaaggc cccaactagc agctcccaga gaagtttcgt 1141 ggagtttatc ttggagcctc tttataagat cctcgcccag gttgtaggtg acgtggacac 1201 cagcctccca cggaccctag acgagcttgg catccacctg acgaaggagg agctgaagct 1261 gaacatccgc cccttgctca ggctggtctg caaaaagttc tttggcgagt tcacaggctt 1321 tgtggacatg tgtgtgcagc atatcccttc tccaaaggtg ggcgccaagc ccaagattga 1381 gcacacctac accggtggtg tggactccga cctcggcgag gctatgagtg actgtgaccc 1441 tgatggcccc ctgatgtgcc acactactaa gatgtacagc acagatgatg gagtccagtt 1501 tcacgccttt ggccgggtgc tgagtggcac cattcatgct gggcagcctg tgaaggtact 1561 gggggagaac tacaccctgg aggatgagga agactcccag atatgcaccg tgggccgcct 1621 ttggatctct gtggccaggt accacatcga ggtgaaccgt gttcctgctg gcaactgggt 1681 tctgattgaa ggtgttgatc aaccaattgt gaagacagca accataaccg aaccccgagg 1741 caatgaggag gctcagattt tccgaccctt gaagttcaat accacatctg ttatcaagat 1801 tgctgtggag ccagtcaacc cctcagagct gcccaagatg cttgatggcc tgcgcaaggt 1861 caacaagagc tatccatccc tcaccaccaa ggtggaggag tctggcgagc atgtgatcct 1921 gggcactggg gagctctacc tggactgtgt gatgcatgat ttgcggaaga tgtactcaga 1981 gatagacatc aaggtggctg acccagttgt cacgttttgt gagacggtgg tggaaacatc 2041 ctccctcaag tgctttgctg aaacgcctaa taagaagaac aagatcacca tgattgctga 2101 gcctcttgag aagggcctgg cagaggacat agagaatgag gtggtccaga ttacgtggaa 2161 caggaagaag ctgggagagt tcttccagac caagtacgat tgggatctgc tggctgcccg 2221 ttccatctgg gcttttggcc ctgatgcgac tggccccaac attctggtgg atgatactct 2281 gccctctgag gtggacaagg ctcttcttgg ttcagtgaag gacagcatcg ttcaaggttt 2341 ccagtgggga accagggagg gccccctctg tgatgaattg attcggaatg tcaagtttaa 2401 gatcctggat gcggtggttg cccaggagcc cctgcaccgg ggcgggggcc agatcatccc 2461 cacagccagg agagtcgtct actctgcctt cctcatggct actcctcgtc tgatggagcc 2521 ttactacttt gtagaggtcc aggcccctgc agattgcgtc tctgcagttt ataccgtcct 2581 ggccaggcgc agggggcacg tgactcagga tgcacccatc ccaggctccc ctctgtacac 2641 catcaaagct tttatcccgg ccatcgactc ttttggcttt gagactgatc tccggactca 2701 cacccaggga caagcctttt ctctgtctgt cttccaccac tggcagattg tgcctggtga 2761 tcccctggac aagagcattg tcatccgccc cttggagcca cagccagctc ctcacctggc 2821 ccgggaattc atgatcaaaa cccgccgtag gaagggcctc agtgaagatg tgagcatcag 2881 caaattcttc gatgatccta tgttgctgga acttgccaaa caggatgttg tgctcaatta 2941 ccccatgtga gtgcgtggac tcctgggagc tcctgctccc tacagtgggc tgcaactcct 3001 gtacttgaag ctgagacctc atatgacgtg gccttcgtgt tgtcagagag tgtctggaag 3061 ctgctgttgc catcttgaac aactcaccaa cctccaaccc agagccccag tgagagagga 3121 gcatttggcc tcctgcttcc ttctgtggcc tctgccgggc tccattccca aggaaaagag 3181 aggagcttgg gctcacagaa agagaagggg atgaaacccc aaggggccct atctttggga 3241 tttacatgga attttatttt ctacaagttt gaccttagcc atggtttgca agtgaacaga 3301 acattctgac ctcaaaaaaa aaaaaaaaaa aa //