LOCUS BC002351 1824 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens melanoma antigen family A, 9, mRNA (cDNA clone
MGC:8421 IMAGE:2820966), complete cds.
ACCESSION BC002351
VERSION BC002351.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1824)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1824)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002351.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335238.
FEATURES Location/Qualifiers
source 1..1824
/db_xref="H-InvDB:HIT000030818_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8421 IMAGE:2820966"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1824
/gene="MAGEA9"
/db_xref="GeneID:4108"
/db_xref="HGNC:HGNC:6807"
/db_xref="MIM:300342"
CDS 281..1228
/gene="MAGEA9"
/codon_start=1
/product="melanoma antigen family A, 9"
/protein_id="AAH02351.1"
/db_xref="GeneID:4108"
/db_xref="HGNC:HGNC:6807"
/db_xref="MIM:300342"
/translation="MSLEQRSPHCKPDEDLEAQGEDLGLMGAQEPTGEEEETTSSSDS
KEEEVSAAGSSSPPQSPQGGASSSISVYYTLWSQFDEGSSSQEEEEPSSSVDPAQLEF
MFQEALKLKVAELVHFLLHKYRVKEPVTKAEMLESVIKNYKRYFPVIFGKASEFMQVI
FGTDVKEVDPAGHSYILVTALGLSCDSMLGDGHSMPKAALLIIVLGVILTKDNCAPEE
VIWEALSVMGVYVGKEHMFYGEPRKLLTQDWVQENYLEYRQVPGSDPAHYEFLWGSKA
HAETSYEKVINYLVMLNAREPICYPSLYEEVLGEEQEGV"
BASE COUNT 468 a 423 c 499 g 434 t
ORIGIN
1 ctgggggtca gagagaaggg agaggcctcc ttctgagggg cggcttgata ccggtggagg
61 agctccagga agcaggcagg ccttggtctg agacagtgtc ctcaggtcgc agagcagagg
121 agacccaggc agtgtcagca gtgaaggttc tcgggacagg ctaaccagga ggacaggagc
181 cccaagaggc cccagagcag cactgacgaa gacctgcctg tgggtctcca tcgcccagct
241 cctgcccacg ctcctgactg ctgccctgac cagagtcatc atgtctctcg agcagaggag
301 tccgcactgc aagcctgatg aagaccttga agcccaagga gaggacttgg gcctgatggg
361 tgcacaggaa cccacaggcg aggaggagga gactacctcc tcctctgaca gcaaggagga
421 ggaggtgtct gctgctgggt catcaagtcc tccccagagt cctcagggag gcgcttcctc
481 ctccatttcc gtctactaca ctttatggag ccaattcgat gagggctcca gcagtcaaga
541 agaggaagag ccaagctcct cggtcgaccc agctcagctg gagttcatgt tccaagaagc
601 actgaaattg aaggtggctg agttggttca tttcctgctc cacaaatatc gagtcaagga
661 gccggtcaca aaggcagaaa tgctggagag cgtcatcaaa aattacaagc gctactttcc
721 tgtgatcttc ggcaaagcct ccgagttcat gcaggtgatc tttggcactg atgtgaagga
781 ggtggacccc gccggccact cctacatcct tgtcactgct cttggcctct cgtgcgatag
841 catgctgggt gatggtcata gcatgcccaa ggccgccctc ctgatcattg tcctgggtgt
901 gatcctaacc aaagacaact gcgcccctga agaggttatc tgggaagcgt tgagtgtgat
961 gggggtgtat gttgggaagg agcacatgtt ctacggggag cccaggaagc tgctcaccca
1021 agattgggtg caggaaaact acctggagta ccggcaggtg cccggcagtg atcctgcgca
1081 ctacgagttc ctgtggggtt ccaaggccca cgctgaaacc agctatgaga aggtcataaa
1141 ttatttggtc atgctcaatg caagagagcc catctgctac ccatcccttt atgaagaggt
1201 tttgggagag gagcaagagg gagtctgagc accagccgca gccggggcca aagtttgtgg
1261 ggtcagggcc ccatccagca gctgccctgc cccatgtgac atgaggccca ttcttcgctc
1321 tgtgtttgaa gagagcaatc agtgttctca gtggcagtgg gtggaagtga gcacactgta
1381 tgtcatctct gggttccttg tctattgggt gatttggaga tttatccttg ctcccttttg
1441 gaattgttca aatgttcttt taatggtcag tttaatgaac ttcaccatcg aagttaatga
1501 atgacagtag tcacacatat tgctgtttat gttatttagg agtaagattc ttgcttttga
1561 gtcacatggg gaaatccctg ttattttgtg aattgggaca agataacata gcagaggaat
1621 taataatttt tttgaaactt gaacttagca gcaaaataga gctcataaag aaatagtgaa
1681 atgaaaatgt agttaattct tgccttatac ctctttctct ctcctgtaaa attaaaacat
1741 atacatgtat acctggattt gcttggcttc tttgagcatg taagagaaat aaaaattgaa
1801 agaataaaaa aaaaaaaaaa aaaa
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