LOCUS BC001979 2886 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens family with sequence similarity 129, member B, mRNA
(cDNA clone IMAGE:3461906), partial cds.
ACCESSION BC001979
VERSION BC001979.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2886)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2886)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: n Column: 8.
FEATURES Location/Qualifiers
source 1..2886
/db_xref="H-InvDB:HIT000030798"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3461906"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2886
/gene="FAM129B"
/gene_synonym="bA356B19.6"
/gene_synonym="C9orf88"
/gene_synonym="DKFZP434H0820"
/gene_synonym="FLJ13518"
/gene_synonym="FLJ22151"
/gene_synonym="FLJ22298"
/gene_synonym="MEG-3"
/gene_synonym="OC58"
/gene_synonym="RP11-356B19.6"
/db_xref="GeneID:64855"
/db_xref="HGNC:HGNC:25282"
CDS <1..1371
/gene="FAM129B"
/gene_synonym="bA356B19.6"
/gene_synonym="C9orf88"
/gene_synonym="DKFZP434H0820"
/gene_synonym="FLJ13518"
/gene_synonym="FLJ22151"
/gene_synonym="FLJ22298"
/gene_synonym="MEG-3"
/gene_synonym="OC58"
/gene_synonym="RP11-356B19.6"
/codon_start=1
/product="FAM129B protein"
/protein_id="AAH01979.2"
/db_xref="GeneID:64855"
/db_xref="HGNC:HGNC:25282"
/translation="LSKVQQVQPAMQAVIRTDMDQIITSKEHLASKIRAFILPKAEVC
VRNHVQPYIPSILEALMVPTSQGFTEVRDVFFKEVTDMNLNVINEGGIDKLGEYMEKL
SRLAYHPLKMQSCYEKMESLRLDGLQQRFDVSSTSVFKQRAQIHMREQMDNAVYTFET
LLHQELGKGPTKEELCKSIQRVLERVLKKYDYDSSSVRKRFFREALLQISIPFLLKKL
APTCKSELPRFQELIFEDFARFILVENTYEEVVLQTVMKDILQAVKEAAVQRKHNLYR
DSMVMHNSDPNLHLLAEGAPIDWGEEYSNSGGGGSPSPSTPESATLSEKRRRAKQVVS
VVQDEEVGLPFEASPESPPPASPDGVTEIRGLLAQGLRPESPPPAGPLLNGALAGESP
QPKAAPEASSPPASPLQHLLPGKAVDLGPPKPSDQETGEQVSSPSSHPALHTTTEDSA
GVQTEF"
BASE COUNT 519 a 889 c 918 g 560 t
ORIGIN
1 ctgtccaagg tgcagcaggt gcagccggcc atgcaggccg tcatccgaac tgacatggac
61 caaattatca cctccaagga gcaccttgcc agcaagatcc gagccttcat cctccccaag
121 gcagaggtgt gcgtgcggaa ccatgtccag ccctacatcc catccatcct ggaggccctg
181 atggtcccca ccagccaggg cttcactgag gtgcgagatg tcttcttcaa ggaggtcacg
241 gacatgaacc tgaacgtcat caacgagggc ggcattgaca agctgggcga gtacatggag
301 aagctgtccc ggctggcgta ccaccccctg aagatgcaga gctgctatga gaagatggag
361 tcgctgcgac tggacgggct gcagcagcga tttgatgtgt ccagcacgtc cgtgttcaag
421 cagcgagccc agatccacat gcgggagcaa atggacaatg ccgtgtatac gttcgagacc
481 ctcctgcacc aggagctggg gaaggggccc accaaggagg agctgtgcaa gtccatccag
541 cgggtcctgg agcgggtgct gaagaaatac gactacgaca gcagctctgt gcggaagagg
601 ttcttccggg aggcgctgct gcagatcagc atcccgttcc tgctcaagaa gctggcccct
661 acctgcaagt cggagctgcc ccggttccag gagctgatct tcgaggactt tgccaggttc
721 atcctggtgg aaaacacgta cgaggaggtg gtgctgcaga ccgtcatgaa ggacatcctg
781 caggctgtga aggaggccgc ggtgcagagg aagcacaacc tctaccggga cagcatggtc
841 atgcacaaca gcgaccccaa cctgcacctg ctggccgagg gcgcccccat cgactggggc
901 gaggagtaca gcaacagcgg cgggggcggc agccccagcc ccagcacccc ggagtcagcc
961 accctctcgg aaaagcgacg gcgcgccaag caggtggtct ctgtggtcca ggatgaggag
1021 gtggggctgc cctttgaggc tagccctgag tcaccaccac ctgcgtcccc ggacggtgtc
1081 actgagatcc gaggcctgct ggcccaaggt ctgcggcctg agagcccccc accagccggc
1141 cccctgctca acggggccct cgctggggag agtccccagc ctaaggccgc ccccgaggcc
1201 tcctcgccgc ctgcctcacc cctccagcat ctcctgcctg gaaaggctgt ggaccttggg
1261 ccccccaagc ccagcgacca ggagactgga gagcaggtgt ccagccccag cagccacccc
1321 gccctccaca ccaccaccga ggacagtgca ggggtgcaga ctgagttcta ggccagtggg
1381 tccctgactg ctgcacatgg cacaggccgt tcccttccgg acccaggcag gctcagctct
1441 ggggagggca ccctggtctg tgccttgtgg gtggaggcgg ggcagggctg tgtggcaccg
1501 ccagggagcg ggcccacctg agtcacttta ttgggttcag tcaacacttt cttgctccct
1561 gttttctctt ctgtgggatg atctcagatg caggggctgg ttttggggtt ttcctgcttg
1621 tgccaagggc tggacactgc tggggggctg gaaagcccct cccttcctgt ccttctgtgg
1681 cctccatccc ctcatgggtg ctgccatcct tcctggagag agggaggtga aagctggtgt
1741 gagcccagtg ggttcccgcc cactcaccca ggagctggct gggccaggac cgggagaggg
1801 agcactgctg ccctcctggc cctgctcctt ccgcagttag gggtggaccg agcctcgctt
1861 tccccactgt tctggaggga aggggaagga gggggtcttc aggctggagc caggctgggg
1921 gtgctgggtg gagagatgag atttaggggg tgcctcatgg ggtgggcagg cctggggtga
1981 aatgagaaag gcccagaacg tgcaggtctg cggaggggaa gtgtcctgag tgaaggaggg
2041 gacccccatc ctgggggatg ctgggagtga gtgagtgaga tggctgagtg agggttatgg
2101 ggagcctgag gttttatggg cctgtgtatc cccttctccc ggccccagcc tgcctccctc
2161 ctgcccgcct ggcccacagg tctccctctg gtccctgtcc ctctggtggt tggggatgga
2221 gcggcagcaa ggggtgtaat ggggctgggt tctgtcttct acaggccacc ccgaggtcct
2281 cagtggttgc ctggggagcc ggacggggct cctgaggggt acaggttggg tgggccctcc
2341 ctgagggtct ggggtcaggc tttggcctct gctgcctctc agtcaccaag tcacctccct
2401 ctgaaaatcc agtcccttct ttggatgtcc ttgtgagtca ctctgggcct ggctgtcgtc
2461 cctcctcagc ttcttgttcc tgggacaagg gtcaagccag gatgggccca ggcctgggat
2521 cccccacctc aggaccccca ggccccctcc cctgctgctt tgcggggggc agggcagaaa
2581 tggactcctt ttgggtcccc gaggtggggt cccctcccag ccctgcatcc tccgtgccct
2641 agacctgctc cccagaggag gggccttgac ccacaggacg tgtggtggcg cctggcactc
2701 agggaccccc agctgcccca gccctggtct ctggcgcatc tcttccctct tgtcccgaag
2761 atctgcgcct ctagtgcctt ttgaggggtt cccatcatcc ctccctgata ttgtattgaa
2821 aatattatgc acactgttca tgcttctact aatcaataaa cgctttattt aaaaaaaaaa
2881 aaaaaa
//