LOCUS BC001978 2781 bp mRNA linear HUM 24-JUN-2004
DEFINITION Homo sapiens tetratricopeptide repeat domain 7A, mRNA (cDNA clone
IMAGE:3461487), partial cds.
ACCESSION BC001978
VERSION BC001978.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2781)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2781
/db_xref="H-InvDB:HIT000086118"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3461487"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2781
/gene="TTC7A"
/gene_synonym="KIAA1140"
/gene_synonym="TTC7"
/db_xref="GeneID:57217"
CDS <1..1354
/gene="TTC7A"
/gene_synonym="KIAA1140"
/gene_synonym="TTC7"
/codon_start=2
/product="TTC7A protein"
/protein_id="AAH01978.1"
/db_xref="GeneID:57217"
/translation="FAFGEFHLWYQVALSMVACGKSAYAVSLLRECVKLRPSDPTVPL
MAAKVCIGSLRWLEEAEHFAMMVISLGEEAGEFLPKGYLALGLTYSLQATDATLKSKQ
DELHRKALQTLERAQQLAPSDPQVILYVSLQLALVRQISSAMEQLQEALKVRKDDAHA
LHLLALLFSAQKHHQHALDVVNMAITEHPENFNLMFTKVKLEQVLKGPEEALVTCRQV
LRLWQTLYSFSQLGGLEKDGSFGEGLTMKKQSGMHLTLPDAHDADSGSRRASSIAASR
LEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAGLFP
TSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLAQK
VLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTALELEASSPVLPFSIIPREL
"
BASE COUNT 539 a 824 c 806 g 612 t
ORIGIN
1 gtttgcgttt ggagaatttc acctttggta ccaggtggcc ctctccatgg tggcttgtgg
61 gaagtcagcc tacgctgtgt ccctgctgcg ggagtgtgtg aagttgcggc cctcggaccc
121 caccgtgccc ctgatggccg cgaaggtctg catcgggtcc cttcgctggc tagaggaagc
181 agagcacttt gccatgatgg tgatcagcct cggagaggaa gccggggagt tcctccccaa
241 gggctacctg gctctgggtc tcacctatag cctgcaggcc accgacgcca ccctgaagtc
301 caagcaagat gaattgcacc ggaaggcact gcagacgctg gagagggctc agcagctggc
361 gcccagtgac ccccaggtca tcctctatgt ctcgctgcag ctggccctcg tccgacagat
421 ctccagtgcc atggagcagc tgcaggaggc cctgaaggta cgcaaggatg atgcccacgc
481 cctccacctg ctggcactgc tcttctctgc ccagaagcac caccagcatg ccctggatgt
541 tgtcaacatg gccatcaccg agcaccctga gaacttcaac ctgatgttca ccaaggtgaa
601 gctggagcag gtgctgaaag gcccagagga agccctcgtg acctgcagac aagtgctgag
661 gctgtggcag accctgtaca gcttctccca gctgggaggc ctagaaaagg atggcagctt
721 cggtgagggc ctcaccatga agaagcagag tggcatgcac ctgactttgc ctgatgccca
781 tgatgcagac tctggctccc ggcgggcttc gtccatcgcc gcctcccggc tggaggaggc
841 catgtcagag ctgactatgc cctcttcggt cctgaagcag ggccccatgc agctgtggac
901 cacgctggaa cagatctggc tgcaggctgc tgagctgttc atggagcagc agcacctcaa
961 ggaagcaggt ttctgcatcc aggaggcggc gggcctcttc cccacttctc actcagtact
1021 ctatatgcgg ggccggctgg ctgaggtgaa gggcaacctg gaggaggcca agcagctgta
1081 caaggaggcg ctcacggtga acccagatgg cgtgcgcatc atgcatagcc tgggtctgat
1141 gctgagtcgg ctgggccaca agagcttggc ccagaaggtg cttcgtgatg ccgtggagag
1201 gcagagtacg tgccacgagg cgtggcaggg cctgggcgag gtgctgcagg cccagggcca
1261 gaacgaggct gccgttgact gcttcctcac cgcccttgag ctggaggcca gcagccctgt
1321 actgcccttc tccatcatcc ccagagagct ctgacgacgc tgcagccgca gggagggagg
1381 ggctggccag agggagaggc agcagggaac gtgggtcagg gtggggcaac agtggcatca
1441 ggtgcggggc ctcagggaaa tacatcttta gtgaacgcct ctgcagctgc agccctcgtt
1501 ctcttggctg ggccaagagg gccttcctgg atttctttgt tggtgccttg ggaaacagtc
1561 tgacttgaac cctaagtgcc tttggagagt tttgtggtga ccagacttgc tccccaagag
1621 ctgggcagcg gggagcctca cagctgtcct tcaccctcac ccatgcctct ggcttggggt
1681 ctgggtgggg ggttctcact ccccactctc agcacagtac agacttctgg atctctctca
1741 ggtcttgccc agggcggtca caatgtgaag aaactgcggg caagtgggaa gactatgaga
1801 tttctgggtt cccttctcag acttggagtt agtagatgat tcctgcattg cccctgcttg
1861 ccctctgaga ccagctgggc cccaccttgc tctttccccc tgctaccaag tgcctttggg
1921 gcctctgggg tctgaccagg ggtactgagc accggcccta acacttccat ctccacccac
1981 cccatctccc tggcgatgtg ctccagccca agcagcctcc gtaggcttta gatcctgtgg
2041 ttgccagatc cagtcctttc taataccctg agtcaacaca ttactcctgc aggtcttagg
2101 ctacaatgca ggtcccttga gggccaccaa catggaggta ggcagtttct aggactgtcc
2161 ccagtacatc tcaccaccca cagccctttt tttgccttga ttcgagcctc accctggcct
2221 tttggcttcc cctgcctgag agagacctga ggaggggaca gagcccagcc cctctcctgt
2281 ggctgagcag gcctctgtgt ccatgacacc tgtcttccgg gcctgggggc tgtgggtgta
2341 tgtcctccct actggcttcc ccggcccctg ctgcatgatg ctcttggaac tcttccccaa
2401 ggagtcagtc ccccaggcct atcaggggat ccttttgtat ctgcactttg ggttttagtt
2461 tcaaagctcc atcaggtaca gcttgcattt caggatgtgt ggaaagctcg ggtgagggct
2521 gccctggttc atcatagctc caccttcctc ggaaggagtg ggctgttgga gaccccccat
2581 ccatggcaca ctagctcagc actgcatttc ccgagatgat tcccaagaca gctggtgcct
2641 cctggctttc ctgtgccagg ccaaggggca ccacagagga ccctggatcc tttgcctctt
2701 cttggttgaa ggatctctat gtatgtgtgt atataaatat agttttttat ctatataaaa
2761 aaaaaaaaaa aaaaaaaaaa a
//