LOCUS BC001965 3032 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAD54 homolog B (S. cerevisiae), mRNA (cDNA clone
MGC:4982 IMAGE:3452509), complete cds.
ACCESSION BC001965
VERSION BC001965.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3032)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3032)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC001965.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20143928.
FEATURES Location/Qualifiers
source 1..3032
/db_xref="H-InvDB:HIT000030791"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4982 IMAGE:3452509"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3032
/gene="RAD54B"
/gene_synonym="FSBP"
/db_xref="GeneID:25788"
/db_xref="HGNC:HGNC:17228"
/db_xref="MIM:604289"
CDS 74..2806
/gene="RAD54B"
/gene_synonym="FSBP"
/codon_start=1
/product="RAD54 homolog B (S. cerevisiae)"
/protein_id="AAH01965.1"
/db_xref="GeneID:25788"
/db_xref="HGNC:HGNC:17228"
/db_xref="MIM:604289"
/translation="MRRSAAPSQLQGNSFKKPKFIPPGRSNPGLNEEITKLNPDIKLF
EGVAINNTFLPSQNDLRICSLNLPSEESTREINNRDNCSGKYCFEAPTLATLDPPHTV
HSAPKEVAVSKEQEEKSDSLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFILKNLE
GKDIGRGIGYKFKELEKIEEGQTLMICGKEIEVMGVISPDDFSSGRCFQLGGGSTAIS
HSSQVARKCFSNPFKSVCKPSSKENRQNDFQNCKPRHDPYTPNSLVMPRPDKNHQWVF
NKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTL
QCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH
KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISL
SCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE
KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQ
VVRFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLL
SVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKR
HGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDI
DWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKT
SEHIQFSVEELKNLFTLHESSDCVTHDLLDCECTGEEVHTGDSLEKFIVSRDCQLGPH
HQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERITENVSFIFQNITTQATGT"
BASE COUNT 1018 a 520 c 597 g 897 t
ORIGIN
1 gctggttacc agaaggactt ctttgcaggg ccagtggttt ctgtcagatt ttcgccggtc
61 acgactgctg aatatgagac gatctgcagc accaagtcag ttgcagggga attccttcaa
121 aaaaccaaaa tttatacctc caggaagaag taatccaggt ctgaatgaag agattacaaa
181 actgaatcca gatataaaat tatttgaggg tgttgcaatt aataacacct ttctcccgtc
241 acaaaatgat cttagaatat gcagtttaaa tctgcctagt gaagaaagta ctagagaaat
301 caataacaga gataattgca gtggaaaata ttgttttgaa gcacctacac tggcaacatt
361 agatccacct catacagttc attcggctcc taaagaagta gcagtgtcca aggaacaaga
421 agagaaatct gatagcctag ttaaatattt cagtgttgtt tggtgtaagc cttcaaagaa
481 aaaacataaa aagtgggaag gtgatgctgt tcttattgta aaaggaaagt catttatatt
541 aaagaatttg gaaggcaaag acattggaag aggcattggt tataaattca aagagcttga
601 aaagattgaa gagggccaaa cactgatgat ttgtggaaaa gaaatagaag tcatgggtgt
661 aatctctcca gatgacttca gcagtggcag gtgttttcag cttggaggag gaagtactgc
721 tatctcgcat tcttctcagg ttgccaggaa atgtttctct aaccctttca aaagtgtttg
781 taaaccaagt tcaaaggaaa atagacagaa tgatttccaa aattgcaaac cacgccatga
841 cccatatacg ccaaattccc tcgttatgcc acgaccagat aagaatcacc agtgggtatt
901 caataagaac tgtttccctc ttgtggatgt agtgattgat ccttaccttg tatatcatct
961 tcgaccacat cagaaagaag gaatcatatt cctttatgaa tgtgtaatgg gaatgagaat
1021 gaatggcaga tgtggagcta ttcttgctga tgaaatgggt ttagggaaga cattgcaatg
1081 tatttcgctc atctggaccc tgcagtgtca gggaccctat ggaggcaagc cagtaataaa
1141 gaagacacta attgtcacac ctggaagctt ggtgaataat tggaagaaag aatttcaaaa
1201 atggctagga agtgaaagga tcaagatatt tactgttgat caggaccaca aagttgaaga
1261 attcatcaag tctatatttt attctgttct tattatcagt tatgaaatgt tacttcgttc
1321 cctggatcaa attaagaata taaaatttga tcttctaatc tgtgacgagg ggcatcgttt
1381 gaagaacagt gccattaaga caactacagc cctcattagc ctttcttgtg agaaaagaat
1441 aattctaact ggtactccaa ttcagaatga tctgcaagaa ttttttgcat taattgattt
1501 tgtaaatcca ggaatattag gctctttgtc atcttatagg aaaatatatg aagaacccat
1561 cattttatcg agagaacctt ctgcttctga ggaagaaaag gagttaggag aaagaagagc
1621 agctgaactt acttgcctca ctggactctt tatccttaga agaacccaag aaattataaa
1681 taaatatctc ccacctaaaa tagagaatgt tgtcttttgc cgaccaggag cactacagat
1741 tgagctttat cgaaagctgt taaattctca ggttgtcagg ttctgccttc aagggttgtt
1801 ggaaaatagt ccccatctaa tatgtatagg agctcttaaa aaactgtgca atcacccctg
1861 ccttttgttc aactctataa aggaaaagga atgtagctca acttgtgata aaaatgaaga
1921 aaagagtcta tacaaaggct tgctaagtgt gtttcctgct gactacaacc ctctcctgtt
1981 tactgaaaag gagtcaggaa aactacaggt gttgtccaag ctcttagcgg ttatccacga
2041 acttcgacct actgaaaagg tggtgttggt atccaactat acacaaacct tgaacatttt
2101 acaagaagta tgtaagcgtc atggatatgc ttatacaaga cttgatggac aaacaccaat
2161 ctctcaaagg cagcagattg ttgatggctt taacagtcaa cactcttctt tttttatttt
2221 tttgttaagt tcaaaagctg gtggtgtagg acttaacctc attggaggat ctcacttaat
2281 tctctatgac attgattgga atccagccac tgacattcag gcaatgtcta gagtatggag
2341 agatggtcag aaatatcctg tacatattta cagactccta actacaggta caatagaaga
2401 aaagatctat caaaggcaga tcagtaagca aggtctttgt ggggcagttg tcgacctcac
2461 caagacatct gaacatattc agttttcagt agaagaactt aaaaatttgt tcacattaca
2521 tgaaagttca gattgtgtta ctcatgatct gcttgactgt gagtgtacag gagaagaagt
2581 tcatacaggt gattcgttgg aaaaattcat tgtctctaga gattgtcagc ttggtccaca
2641 tcaccagaaa tctaactccc tgaaacctct ttctatgtcc cagctgaagc aatggaaaca
2701 tttttctgga gatcatttaa atcttacaga tccttttctt gaaagaataa cagaaaatgt
2761 gtcattcatt tttcagaata taaccactca agctactggc acatagtgaa agattacttc
2821 tgacattcca ttgctcttct tttgaaaatt agtatggtaa ttaaatgtac tttttgaaaa
2881 ttaatagaat tatttaaatt acagtatatg ttgcaaaata tatcactttt gatacaatag
2941 tcaaaattga gtggtttaat gttttgtaaa tattaagtgt ttaaatgaaa aataaagatg
3001 tgcttatatc attgtaaaaa aaaaaaaaaa aa
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