LOCUS BC001961 2747 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens solute carrier family 38, member 7, mRNA (cDNA clone
MGC:931 IMAGE:3510557), complete cds.
ACCESSION BC001961
VERSION BC001961.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2747)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2747)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: g Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922691.
FEATURES Location/Qualifiers
source 1..2747
/db_xref="H-InvDB:HIT000030787"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:931 IMAGE:3510557"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2747
/gene="SLC38A7"
/db_xref="GeneID:55238"
/db_xref="HGNC:HGNC:25582"
CDS 350..1738
/gene="SLC38A7"
/codon_start=1
/product="solute carrier family 38, member 7"
/protein_id="AAH01961.1"
/db_xref="GeneID:55238"
/db_xref="HGNC:HGNC:25582"
/translation="MAQVSINNDYSEWDLSTDAGERARLLQSPCVDTAPKSEWEASPG
GLDRGTTSTLGAIFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVI
LAYCSQASNERTYQEVVWAVCGKLTGVLCEVAIAVYTFGTCIAFLIIIGDQQDKIIAV
MAKEPEGASGPWYTDRKFTISLTAFLFILPLSIPREIGFQKYASFLSVVGTWYVTAIV
IIKYIWPDKEMTPGNILTRPASWMAVFNAMPTICFGFQCHVSSVPVFNSMQQPEVKTW
GGVVTAAMVIALAVYMGTGICGFLTFGAAVDPDVLLSYPSEDMAVAVARAFIILSVLT
SYPILHFCGRAVVEGLWLRYQGVPVEEDVGRERRRRVLQTLVWFLLTLLLALFIPDIG
KVISVIGGLAACFIFVFPGLCLIQAKLSEMEEVKPASWWVLVSYGVLLVTLGAFIFGQ
TTANAIFVDLLA"
BASE COUNT 574 a 815 c 745 g 613 t
ORIGIN
1 atcccccaag ctccatttca tgagtaagcg tgagagccgc tcagtttcct ccagctctgc
61 tgaagccagc acagaagtag cccaaactct tccctctgct gacagcaaat tttaggcaaa
121 gtcttgagaa agaagaaatt gggtccagaa agggaagtga ggagaatcag atcccagacc
181 tttggggaga aggagcaacc gcctctggca cagcccatta gggagaaaga gcaggttgag
241 aagagtccta agctaacagc cccaaacagg tgggtgttgc tcagctccct gaggcatgtg
301 gttgtaaggc agaacccaca gaccttgcag gaagaaggct ctcggggcca tggcccaggt
361 cagcatcaac aatgactaca gcgagtggga cttgagcacg gatgccgggg agcgggctcg
421 gctgctgcag agtccctgtg tggacacagc ccccaagagt gagtgggaag cctctcctgg
481 gggtctggac agaggcacca cttccacact tggggccatc ttcatcgtcg tcaacgcgtg
541 cctgggtgca gggttactca acttcccagc agccttcagc actgcggggg gcgtggcagc
601 aggcatcgca ctgcagatgg gtatgctggt tttcatcatc agtggccttg tcatcctggc
661 ctactgctcc caggccagca atgagaggac ctaccaggag gtggtatggg ctgtgtgtgg
721 caagctgaca ggtgtgctat gtgaggtggc catcgctgtc tacacctttg gcacctgcat
781 tgccttccta atcatcattg gcgaccagca ggacaagatt atagctgtga tggcgaaaga
841 gccggagggg gccagcggcc cttggtacac agaccgcaag ttcaccatca gcctcactgc
901 cttcctcttc atcctgcccc tctccatccc cagggagatt ggtttccaga aatatgccag
961 cttcctgagc gtcgtgggta cctggtacgt cacagccatc gttatcatca agtacatctg
1021 gccagataaa gagatgaccc cagggaacat cctgaccagg ccggcttcct ggatggctgt
1081 gttcaatgcc atgcccacca tctgcttcgg atttcagtgc cacgtcagca gtgtgcccgt
1141 cttcaacagc atgcagcagc ctgaagtgaa gacctggggt ggagtggtga cagctgccat
1201 ggtcatagcc ctcgctgtct acatggggac aggcatctgt ggcttcctga cctttggagc
1261 tgctgtggat cctgacgtgc tcctgtccta tccctcggag gacatggccg tggccgttgc
1321 ccgagccttc atcatcctga gcgtgctcac ctcctaccct atcctgcact tctgtgggcg
1381 ggcggtggtg gaaggcctgt ggctgcgcta ccagggggtg ccagtggagg aggacgtggg
1441 gcgggagcgg cggcggcgag tgctgcagac gctggtctgg ttcctgctca ccctgctgct
1501 ggcgctcttc atccctgaca tcggcaaggt gatctcagtc attggaggcc tggccgcctg
1561 cttcatcttc gtcttcccag ggctgtgcct cattcaagcc aaactctctg agatggaaga
1621 ggtcaaacca gccagctggt gggtgctggt cagctacgga gtcctcttgg tcaccctggg
1681 agccttcatc ttcggccaga ccacagccaa cgccatcttt gtggatctct tggcataacc
1741 actgcctccc agggaacaca aggcctttgc cattggtcgc aggaacccat ctcttagagc
1801 tatggggcca ttcttagtcc acgatcattc caactggtgg gatgacatcc ggacatcctc
1861 ttccagggac tggggcaaac tcaggcccca cacctctgga cagctcaaat ccagtcccct
1921 tcctgctccc cagtcctggc agtgccgtgg atggcggcag gaagtctcac atcatagagg
1981 acccctcctc ctctcccagt tctcaacttc tccatgcctg gaatccacgg gtgaagagag
2041 tcggtagatc tcataagaaa gaatccagtc tgacttccct ctggagaatg actatggaca
2101 gaaggccacc atcctccaca gagcaccctg tcctgagtag gggttgtgct cattacccca
2161 ggccagtggt agcttcctca ggagcctggc cacttccaaa ggtagcactg aagtcatgca
2221 aatacatagt caggtagatt cagaccttgt ccacaccttc ctgggcaacc cccaccatga
2281 acctgtcagc ctctttccca tagctaatag acatttccca ggccttgagg ggccccaccc
2341 tgtctctttc atcaaacctg atggtccagg ctgggcatcc ctctcctcct ccatccccag
2401 acatcaccag gtctaatgtt tacaaacggt gccagcccgg ctctgaagcc aagggccgtc
2461 ccgtgccacg gtgctgtgag tattcctccg ttagctttcc ccataaggtt gggagtatct
2521 gcttttgtgt ctgagatggg cccctctttt cagaggccgc agggtgggtg atggagaagg
2581 ctgagaacct ttcagaccct ctgtgtgggc tgggctggtc agaatcaggg tgtacctccc
2641 cgacaccttc tttttcagtg atgttttctc ttctccctgc ctttcctctg cctcctcccc
2701 tgccagccct agcgtgacta cccagagaca aaaaaaaaaa aaaaaaa
//