LOCUS BC001939 2997 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens elaC homolog 2 (E. coli), mRNA (cDNA clone MGC:4102
IMAGE:2820640), complete cds.
ACCESSION BC001939
VERSION BC001939.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2997)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2997)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147640.
FEATURES Location/Qualifiers
source 1..2997
/db_xref="H-InvDB:HIT000030766"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4102 IMAGE:2820640"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2997
/gene="ELAC2"
/gene_synonym="ELC2"
/gene_synonym="FLJ10530"
/gene_synonym="HPC2"
/db_xref="GeneID:60528"
/db_xref="HGNC:HGNC:14198"
/db_xref="MIM:605367"
CDS 61..2541
/gene="ELAC2"
/gene_synonym="ELC2"
/gene_synonym="FLJ10530"
/gene_synonym="HPC2"
/codon_start=1
/product="elaC homolog 2 (E. coli)"
/protein_id="AAH01939.1"
/db_xref="GeneID:60528"
/db_xref="HGNC:HGNC:14198"
/db_xref="MIM:605367"
/translation="MWALCSLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTRE
KRGPSGCSGGPNTVYLQVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKV
ARLDNIFLTRMHWSNVGGLSGMILTLKETGLPKCVLSGPPQLEKYLEAIKIFSGPLKG
IELAVRPHSAPEYEDETMTVYQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSELN
ENEPHLPHGVSQRRGVRDSSLVVAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIA
AVKDGKSITHEGREILAEELCTPPDPGAAFVVVECPDESFIQPICENATFQRYQGKAD
APVALVVHMAPASVLVDSRYQQWMERFGPDTQHLVLNENCASVHNLRSHKIQTQLNLI
HPDIFPLLTSFRCKKEGPTLSVPMVQGECLLKYQLRPRREWQRDAIITCNPEEFIVEA
LQLPNFQQSVQEYRRSAQDGPAPAEKRSQYPEIIFLGTGSAIPMKIRNVSATLVNISP
DTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSILLQRERAL
ASLGKPLHPLLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERL
ISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPCEALVRMGKDATL
LIHEATLEDGLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQRYAKVPLFSPNFS
EKVGVAFDHMKVCFGDFPTMPKLIPPLKALFAGDIEEMEERREKRELRQVRAALLSRE
LAGGLEDGEPQQKRAHTEEPQAKKVRAQ"
BASE COUNT 740 a 806 c 853 g 598 t
ORIGIN
1 gcacgggaaa cgcgggcgta ggtgaccggc ggctttctca gttttggtgg agacgggcgc
61 atgtgggcgc tttgctcgct gctgcggtcc gcggccggac gcaccatgtc gcagggacgc
121 accatatcgc aggcacccgc ccgccgcgag cggccgcgca aggacccgct gcggcacctg
181 cgcacgcgag agaagcgcgg accgtcgggg tgctccggcg gcccaaacac cgtgtacctg
241 caggtggtgg cagcgggtag ccgggactcg ggcgccgcgc tctacgtctt ctccgagttc
301 aaccggtatc tcttcaactg tggagaaggc gttcagagac tcatgcagga gcacaagtta
361 aaggttgctc gcctggacaa catattcctg acacgaatgc actggtctaa tgttgggggc
421 ttaagtggaa tgattcttac tttaaaggaa accgggcttc caaagtgtgt actttctgga
481 cctccacaac tggaaaaata cctcgaagca atcaaaatat tttctggtcc attgaaagga
541 atagaactgg ctgtgcggcc ccactctgcc ccagaatacg aggatgaaac catgacagtt
601 taccagatcc ccatacacag tgaacagagg aggggaaagc accaaccatg gcagagtcca
661 gaaaggcctc tcagcaggct cagtccagag cgatcttcag actccgagtt gaatgaaaat
721 gagccacacc ttccacatgg tgttagccag agaagagggg tcagggactc ttccctggtc
781 gtagctttca tctgtaagct tcacttaaag agaggaaact tcttggtgct caaagcaaag
841 gagatgggcc tcccagttgg gacagctgcc atcgctccca tcattgctgc tgtcaaggac
901 gggaaaagca tcactcatga aggaagagag attttggctg aagagctgtg tactcctcca
961 gatcctggtg ctgcttttgt ggtggtagaa tgtccagatg aaagcttcat tcaacccatc
1021 tgtgagaatg ccacctttca gaggtaccaa ggaaaggcag atgcccccgt ggccttggtg
1081 gttcacatgg ccccagcatc tgtgcttgtg gacagcaggt accagcagtg gatggagagg
1141 tttgggcctg acacccagca cttggtcctg aatgagaact gtgcctcagt tcacaacctt
1201 cgcagccaca agattcaaac ccagctcaac ctcatccacc cggacatctt ccccctgctc
1261 accagtttcc gctgtaagaa ggagggcccc accctcagtg tgcccatggt tcagggtgaa
1321 tgcctcctca agtaccagct ccgtcccagg agggagtggc agagggatgc cattattact
1381 tgcaatcctg aggaattcat agttgaggcg ctgcagcttc ccaacttcca gcagagcgtg
1441 caggagtaca ggaggagtgc gcaggacggc ccagccccag cagagaaaag aagtcagtac
1501 ccagaaatca tcttccttgg aacagggtct gccatcccga tgaagattcg aaatgtcagt
1561 gccacacttg tcaacataag ccccgacacg tctctgctac tggactgtgg tgagggcacg
1621 tttgggcagc tgtgccgtca ttacggagac caggtggaca gggtcctggg caccctggct
1681 gctgtgtttg tgtcccacct gcacgcagat caccacacgg gcttgccaag tatcttgctg
1741 cagagagaac gcgccttggc atctttggga aagccgcttc accctttgct ggtggttgcc
1801 cccaaccagc tcaaagcctg gctccagcag taccacaacc agtgccagga ggtcctgcac
1861 cacatcagta tgattcctgc caaatgcctt caggaagggg ctgagatctc cagtcctgca
1921 gtggaaagat tgatcagttc gctgttgcga acatgtgatt tggaagagtt tcagacctgt
1981 ctggtgcggc actgcaagca tgcgtttggc tgtgcgctgg tgcacacctc tggctggaaa
2041 gtggtctatt ccggggacac catgccctgc gaggctctgg tccggatggg gaaagatgcc
2101 accctcctga tacatgaagc caccctggaa gatggtttgg aagaggaagc agtggaaaag
2161 acacacagca caacgtccca agccatcagc gtggggatgc ggatgaacgc ggagttcatt
2221 atgctgaacc acttcagcca gcgctatgcc aaggtccccc tcttcagccc caacttcagc
2281 gagaaagtgg gagttgcctt tgaccacatg aaggtctgct ttggagactt tccaacaatg
2341 cccaagctga ttcccccact gaaagccctg tttgctggcg acatcgagga gatggaggag
2401 cgcagggaga agcgggagct gcggcaggtg cgggcggccc tcctgtccag ggagctggca
2461 ggcggcctgg aggatgggga gcctcagcag aagcgggccc acacagagga gccacaggcc
2521 aagaaggtca gagcccagtg aagatctggg agaccctgaa ctcagaaggc tgtgtgtctt
2581 ctgccccacg cacgcacccg tatctgccct ccttgctggt agaagctgaa gagcacggtc
2641 ccccaggagg cagctcagga taggtggtat ggagctgtgc cgaggcttgg gctcccacat
2701 aagcactagt ctatagatgc ctcttaggac tggtgcctgg cacagccgcg ggccaggagg
2761 ctgccacacg gaagcaagca gatgaactaa tttcatttca aggcagtttt taaagaagtc
2821 atggaaacag acggcggcac ctttcctcta atccagcaaa gtgattccct gcacaccaga
2881 gacaagcaga gtaacaggat cagtgggtct aagtgtccga gacttaacga aaatagtatt
2941 tcagctgcaa taaagattga gtttgcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//