LOCUS BC001933 2370 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tyrosyl-tRNA synthetase, mRNA (cDNA clone MGC:4000
IMAGE:2821104), complete cds.
ACCESSION BC001933
VERSION BC001933.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2370)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2370)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38202242.
FEATURES Location/Qualifiers
source 1..2370
/db_xref="H-InvDB:HIT000030760"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4000 IMAGE:2821104"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2370
/gene="YARS"
/gene_synonym="CMTDIC"
/gene_synonym="TYRRS"
/gene_synonym="YRS"
/gene_synonym="YTS"
/db_xref="GeneID:8565"
/db_xref="HGNC:HGNC:12840"
/db_xref="MIM:603623"
CDS 23..1609
/gene="YARS"
/gene_synonym="CMTDIC"
/gene_synonym="TYRRS"
/gene_synonym="YRS"
/gene_synonym="YTS"
/codon_start=1
/product="tyrosyl-tRNA synthetase"
/protein_id="AAH01933.1"
/db_xref="GeneID:8565"
/db_xref="HGNC:HGNC:12840"
/db_xref="MIM:603623"
/translation="MGDAPSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTAT
TGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIK
AMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPL
LSGLLYPGLQALDEEYLKVDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGL
TGSKMSSSEEESKIDLLDRKEDVKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFV
ILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSVEVALNKLLDPIREKFNTPALK
KLASAAYPDPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKI
DVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINR
QVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQT
NFMTKLGSISCKSLKGGNIS"
BASE COUNT 660 a 563 c 625 g 522 t
ORIGIN
1 gggaagcagg ggtagcggag ccatggggga cgctcccagc cctgaagaga aactgcacct
61 tatcacccgg aacctgcagg aggttctggg ggaagagaag ctgaaggaga tactgaagga
121 gcgggaactt aaaatttact ggggaacggc aaccacgggc aaaccacatg tggcttactt
181 tgtgcccatg tcaaagattg cagacttctt aaaggcaggg tgtgaggtaa caattctgtt
241 tgcggacctc cacgcatacc tggataacat gaaagcccca tgggaacttc tagaactccg
301 agtcagttac tatgagaatg tgatcaaagc aatgctggag agcattggtg tgcccttgga
361 gaagctcaag ttcatcaaag gcactgatta ccagctcagc aaagagtaca cactagatgt
421 gtacagactc tcctccgtgg tcacacagca cgattccaag aaggctggag ctgaggtggt
481 aaagcaggtg gagcaccctt tgctgagtgg cctcttatac cccggactgc aggctttgga
541 tgaagagtat ttaaaagtag atgcccaatt tggaggcatt gatcagagaa agattttcac
601 ctttgcagag aagtacctcc ctgcacttgg ctattcaaaa cgggtccatc tgatgaatcc
661 tatggttcca ggattaacag gcagcaaaat gagctcttca gaagaggagt ccaagattga
721 tctccttgat cggaaggagg atgtgaagaa aaaactgaag aaggccttct gtgagccagg
781 aaatgtggag aacaatgggg ttctgtcctt catcaagcat gtcctttttc cccttaagtc
841 cgagtttgtg atcctacgag atgagaaatg gggtggaaac aaaacctaca cagcttacgt
901 ggacctggaa aaggactttg ctgctgaggt tgtacatcct ggagacctga agaattctgt
961 tgaagtcgca ctgaacaagt tgctggatcc aatccgggaa aagtttaata cccctgccct
1021 gaaaaaactg gccagcgctg cctacccaga tccctcaaag cagaagccaa tggccaaagg
1081 ccctgccaag aattcagaac cagaggaggt catcccatcc cggctggata tccgtgtggg
1141 gaaaatcatc actgtggaga agcacccaga tgcagacagc ctgtatgtag agaagattga
1201 cgtgggggaa gctgaaccac ggactgtggt gagcggcctg gtacagttcg tgcccaagga
1261 ggaactgcag gacaggctgg tagtggtgct gtgcaacctg aaaccccaga agatgagagg
1321 agtcgagtcc caaggcatgc ttctgtgtgc ttctatagaa gggataaacc gccaggttga
1381 acctctggac cctccggcag gctctgctcc tggtgagcac gtgtttgtga agggctatga
1441 aaagggccaa ccagatgagg agctcaagcc caagaagaaa gtcttcgaga agttgcaggc
1501 tgacttcaaa atttctgagg agtgcatcgc acagtggaag caaaccaact tcatgaccaa
1561 gctgggctcc atttcctgta aatcgctgaa aggggggaac attagctagc cagcccagca
1621 tcttcccccc ttcttccacc actgagtcat ctgctgtctc ttcagtctgc tccatccatc
1681 acccatttac ccatctctca ggacacggaa gcagcgggtt tggactcttt attcggtgca
1741 gaactcggca aggggcagct taccctcccc agaacccagg atcatcctgt ctggctgcag
1801 tgagagacca acccctaaca agggctgggc cacagcaggg agtccagccc taccttcttc
1861 ccttggcagc tggagaaatc tggtttcaat ataactcatt taaaaattta tgccacagtc
1921 cttataattg gaaaaatact ggtgcccagg ttttcttgga gttatccaag cagctgcgcc
1981 cctagctggg atctggtacc tggactaggc taattacagc ttctccccaa caggaaactg
2041 tgggatttga aaaggaaagg gaagggaaaa cagagaacct agtggtctac caagtggttg
2101 gcaactttcc caatgtctgc ttactctgag gcttggcact gggggccagg gcctgcccca
2161 gggctcctgg aatttccctt gatccagcta ggctgggaca ctccctaaat cagctgcgtg
2221 ttgttagcat caggcagaat gaatggcaga gagtgattct gtcttcatag agggtggggt
2281 acttctccat aaggcatctc agtcaaatcc ccatcactgt cataaattca aataaaatgt
2341 ctgaacaagg gaaaaaaaaa aaaaaaaaaa
//