LOCUS BC001920 1744 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens actin, gamma 1, mRNA (cDNA clone MGC:3728
IMAGE:2820489), complete cds.
ACCESSION BC001920
VERSION BC001920.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1744)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1744)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: e Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11038618.
FEATURES Location/Qualifiers
source 1..1744
/db_xref="H-InvDB:HIT000030748"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3728 IMAGE:2820489"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1744
/gene="ACTG1"
/gene_synonym="ACTG"
/db_xref="GeneID:71"
/db_xref="MIM:102560"
CDS 29..1156
/gene="ACTG1"
/gene_synonym="ACTG"
/codon_start=1
/product="ACTG1 protein"
/protein_id="AAH01920.1"
/db_xref="GeneID:71"
/db_xref="MIM:102560"
/translation="MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
misc_feature 29..1153
/gene="ACTG1"
/gene_synonym="ACTG"
/note="actin; Region: Actin"
/db_xref="CDD:pfam00022"
BASE COUNT 403 a 488 c 461 g 392 t
ORIGIN
1 ccgccgtcgc gtttctctgc cggtcgcaat ggaagaagag atcgccgcgc tggtcattga
61 caatggctcc ggcatgtgca aagctggttt tgctggggac gacgctcccc gagccgtgtt
121 tccttccatc gtcgggcgcc ccagacacca gggcgtcatg gtgggcatgg gccagaagga
181 ctcctacgtg ggcgacgagg cccagagcaa gcgtggcatc ctgaccctga agtaccccat
241 tgagcatggc atcgtcacca actgggacga catggagaag atctggcacc acaccttcta
301 caacgagctg cgcgtggccc cggaggagca cccagtgctg ctgaccgagg cccccctgaa
361 ccccaaggcc aacagagaga agatgactca gattatgttt gagaccttca acaccccggc
421 catgtacgtg gccatccagg ccgtgctgtc cctctacgcc tctgggcgca ccactggcat
481 tgtcatggac tctggagacg gggtcaccca cacggtgccc atctacgagg gctacgccct
541 cccccacgcc atcctgcgtc tggacctggc tggccgggac ctgaccgact acctcatgaa
601 gatcctcact gagcgaggct acagcttcac caccacggcc gagcgggaaa tcgtgcgcga
661 catcaaggag aagctgtgct acgtcgccct ggacttcgag caggagatgg ccaccgccgc
721 atcctcctct tctctggaga agagctacga gctgcccgat ggccaggtca tcaccattgg
781 caatgagcgg ttccggtgtc cggaggcgct gttccagcct tccttcctgg gtatggaatc
841 ttgcggcatc cacgagacca ccttcaactc catcatgaag tgtgacgtgg acatccgcaa
901 agacctgtac gccaacacgg tgctgtcggg cggcaccacc atgtacccgg gcattgccga
961 caggatgcag aaggagatca ccgccctggc gcccagcacc atgaagatca agatcatcgc
1021 acccccagag cgcaagtact cggtgtggat cggtggctcc atcctggcct cactgtccac
1081 cttccagcag atgtggatta gcaagcagga gtacgacgag tcgggcccct ccatcgtcca
1141 ccgcaaatgc ttctaaacgg actcagcaga tgcgtagcat ttgctgcatg ggttaattga
1201 gaatagaaat ttgcccctgg caaatgcaca cacctcatgc tagcctcacg aaactggaat
1261 aagccttcga aaagaaattg tccttgaagc ttgtatctga tatcagcact ggattgtaga
1321 acttgttgct gattttgacc ttgtattgaa gttaactgtt ccccttggta ttaacgtgtc
1381 agggctgagt gttctgggat ttctctagag gctggcaaga accagttgtt ttgtcttgcg
1441 ggtctgtcag ggttggaaag tccaagccgt aggacccagt ttcctttctt agctgatgtc
1501 tttggccaga acaccgtggg ctgttacttg ctttgagttg gaagcggttt gcatttacgc
1561 ctgtaaatgt attcattctt aatttatgta aggttttttt tgtacgcaat tctcgattct
1621 ttgaagagat gacaacaaat tttggttttc tactgttatg tgagaacatt aggccccagc
1681 aacacgtcat tgtgtaagga aaaataaaag tgctgccgta accaaaaaaa aaaaaaaaaa
1741 aaaa
//