LOCUS BC001796 1342 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens germ cell associated 1, mRNA (cDNA clone MGC:3146 IMAGE:3353821), complete cds. ACCESSION BC001796 VERSION BC001796.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1342) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1342) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: n Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13775203. FEATURES Location/Qualifiers source 1..1342 /db_xref="H-InvDB:HIT000030659" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3146 IMAGE:3353821" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1342 /gene="GSG1" /db_xref="GeneID:83445" /db_xref="HGNC:HGNC:19716" CDS 155..1003 /gene="GSG1" /codon_start=1 /product="germ cell associated 1" /protein_id="AAH01796.1" /db_xref="GeneID:83445" /db_xref="HGNC:HGNC:19716" /translation="MELSKAFSGQRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPK PLCEKGLAAKCFDMPVSLDGDTNTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETV EEPGERCRSFIELTPPAKRGEKGLLEFATLQGPCHPTLRFGGKRLMEKASLPSPPLGL CGKNPMVIPGNADHLHRTSIHQLPPATNRLATHWEPCLWAQTERLCCCFLCPVRSPGD GGPHDVFTSLPSDCQLGSRRLETTCLELWLGLLHGLALLHLLHGVGCHHLQHVHQDGA GVQVQA" BASE COUNT 334 a 353 c 356 g 299 t ORIGIN 1 caagaatatg agatagaagg ggaggggtag gaggagaggg aggagggtag gaagacagtt 61 tgcattcttg caacattaaa ccaaagggac ttggagtgca gatggcatcc ttcggttctt 121 ccagacaagc tgcaagacgc tgaccatggc caagatggag ctctcgaagg ccttctctgg 181 ccagcggaca ctcctatctg ccatcctcag catgctatca ctcagcttct ccacaacatc 241 cctgctcagc aactactggt ttgtgggcac acagaaggtg cccaagcccc tgtgcgagaa 301 aggtctggca gccaagtgct ttgacatgcc agtgtccctg gatggagata ccaacacatc 361 cacccaggag gtggtacaat acaactggga gactggggat gaccggttct ccttccggag 421 cttccggagt ggcatgtggc tatcctgtga ggaaactgtg gaagaaccag gggagaggtg 481 ccgaagtttc attgaactta caccaccagc caagagaggt gagaaaggac tactggaatt 541 tgccacgttg caaggcccat gtcaccccac tctccgattt ggagggaagc ggttgatgga 601 gaaggcttcc ctcccctccc ctcccttggg gctttgtggc aaaaatccta tggttatccc 661 tgggaacgca gatcacctac atcggacttc aattcatcag cttcctcctg ctactaacag 721 acttgctact cactgggaac cctgcctgtg ggctcaaact gagcgccttt gctgctgttt 781 cctctgtcct gtcaggtctc ctggggatgg tggcccacat gatgtattca caagtcttcc 841 aagcgactgt caacttgggt ccagaagact ggagaccaca tgtttggaat tatggctggg 901 ccttctacat ggcctggctc tccttcacct gctgcatggc gtcggctgtc accaccttca 961 acacgtacac caggatggtg ctggagttca agtgcaagca tagtaagagc ttcaaggaaa 1021 acccgaactg cctaccacat caccatcagt gtttccctcg gcggctgtca agtgcagccc 1081 ccaccgtggg tcctttgacc agctaccacc agtatcataa tcagcccatc cactctgtct 1141 ctgagggagt cgacttctac tccgagctgc ggaacaaggg atttcaaaga ggggccagcc 1201 aggagctgaa agaagcagtt aggtcatctg tagaggaaga gcagtgttag gagttaagcg 1261 ggtttgggga gtaggcttga gccctacctt acacgtctgc tgattatcaa catgtgctta 1321 agccaaaaaa aaaaaaaaaa aa //