LOCUS BC001786 2234 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FK506 binding protein 4, 59kDa, mRNA (cDNA clone
MGC:2294 IMAGE:3542330), complete cds.
ACCESSION BC001786
VERSION BC001786.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2234)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2234)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17149846.
FEATURES Location/Qualifiers
source 1..2234
/db_xref="H-InvDB:HIT000030649"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2294 IMAGE:3542330"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2234
/gene="FKBP4"
/gene_synonym="FKBP52"
/gene_synonym="FKBP59"
/gene_synonym="HBI"
/gene_synonym="Hsp56"
/gene_synonym="p52"
/gene_synonym="PPIase"
/db_xref="GeneID:2288"
/db_xref="HGNC:HGNC:3720"
/db_xref="MIM:600611"
CDS 154..1533
/gene="FKBP4"
/gene_synonym="FKBP52"
/gene_synonym="FKBP59"
/gene_synonym="HBI"
/gene_synonym="Hsp56"
/gene_synonym="p52"
/gene_synonym="PPIase"
/codon_start=1
/product="FK506 binding protein 4, 59kDa"
/protein_id="AAH01786.1"
/db_xref="GeneID:2288"
/db_xref="HGNC:HGNC:3720"
/db_xref="MIM:600611"
/translation="MTAEEMKATESGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGT
EMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEV
CHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEG
YAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSI
VYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKER
GTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA
FSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQ
LAVCQQRIRRQLAREKKLYANMFERLAEEENKAKAEASSGDHPTDTEMKEEQKSNTAG
SQSQVETEA"
BASE COUNT 559 a 572 c 625 g 478 t
ORIGIN
1 gccgcgtgca gaggtgctca agcctcctcg cggtccgcag tcagtgccgc cgcgcccggc
61 ctcccgcacg ccccgcaggt agcgcccccg cccgcggccc agagtgcgct cgcgccggca
121 ccagctcccg gataaacggc gcgccgcgcg gagatgacag ccgaggagat gaaggcgacc
181 gagagcgggg cgcagtcggc gccgctgccc atggagggag tggacatcag ccccaaacag
241 gacgaaggcg tgctgaaggt catcaagaga gagggcacag gtacagagat gcccatgatt
301 ggggaccgag tctttgtcca ctacactggc tggctattag atggcacaaa gtttgactcc
361 agtctggatc gcaaggacaa attctccttt gacctgggaa aaggggaggt catcaaggct
421 tgggacattg ccatagccac catgaaggtg ggggaggtgt gccacatcac ctgcaaacca
481 gaatatgcct acggttcagc aggcagtcct ccaaagattc cccccaatgc cacgcttgta
541 tttgaggtgg agttgtttga gtttaaggga gaagatctga cggaagagga agatggcgga
601 atcattcgca gaatacagac tcgcggtgaa ggctatgcta agcccaatga gggtgctatc
661 gtggaggttg cactggaagg gtactacaag gacaagctct ttgaccagcg ggagctccgc
721 tttgagattg gcgaggggga gaacctggat ctgccttatg gtctggagag ggccattcag
781 cgcatggaga aaggagaaca ttccatcgtg tacctcaagc ccagctatgc ttttggcagt
841 gttgggaagg aaaagttcca aatcccacca aatgctgagc tgaaatatga attacacctc
901 aagagttttg aaaaggccaa ggagtcttgg gagatgaatt cagaagagaa gctggaacag
961 agcaccatag tgaaagagcg gggcactgtg tacttcaagg aaggtaaata caagcaagct
1021 ttactacagt ataagaagat cgtgtcttgg ctggaatatg agtctagttt ttccaatgag
1081 gaagcacaga aagcacaggc ccttcgactg gcctctcacc tcaacctggc catgtgtcat
1141 ctgaaactac aggccttctc tgctgccatt gaaagctgta acaaggccct agaactggac
1201 agcaacaacg agaagggcct cttccgccgg ggagaggccc acctggccgt gaatgacttt
1261 gaactggcac gggctgattt ccagaaggtc ctgcagctct accccaacaa caaagccgcc
1321 aagacccagc tggctgtgtg ccagcagcgg atccgaaggc agcttgcccg ggagaagaag
1381 ctctatgcca atatgtttga gaggctggct gaggaggaga acaaggccaa ggcagaggct
1441 tcctcaggag accatcccac tgacacagag atgaaggagg agcagaagag caacacggca
1501 gggagccagt ctcaggtgga gacagaagca tagcccctct ccaccagccc tactcctgcg
1561 gctgcctgcc ccccagtctc cccactccac cctgttagtt ttgtaaaaac tgaagaattt
1621 tgagtgaatt agacctttat ttttctatct ggttggatgg tggctttagg ggaaggggga
1681 aaggtgtagg ctgggggatt gaggtgggga atcattttag ctggtgtcag cccctcttcc
1741 cttcctccat tgcacatgaa catatgtcca tccatatata ttcatcagaa tgttaattta
1801 ttttgctccc tctgttaggt ccattttcta agggtagaag aggcaagtgg tagggatgag
1861 gtctgataag aacccagggt ggagagggag actcctgggc agccgttttc ctcatccttt
1921 ccctctccca gtccatttcc aaatgtggcc tccatgtggg tgctagggac atgggaaaaa
1981 ccactgctat gccatttctt ctctctgttc ccttcctcac ccccgacggt gtggctgatg
2041 atgtcttctg gtgtcatggt gaccaccccc tgttccctgt tctggtattt cccctgtcag
2101 tttcccctct cggccaggtt gtgtcccaaa atcccctcag cctcttctct gcacgttgct
2161 gaaggtccag gcttgcctca agttccatgc ttgagcaata aagtggaaac aataaaaaaa
2221 aaaaaaaaaa aaaa
//