LOCUS BC001731 3477 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens cell cycle associated protein 1, mRNA (cDNA clone
MGC:1378 IMAGE:3355481), complete cds.
ACCESSION BC001731
VERSION BC001731.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3477)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3477)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676201.
FEATURES Location/Qualifiers
source 1..3477
/db_xref="H-InvDB:HIT000030609"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1378 IMAGE:3355481"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3477
/gene="CAPRIN1"
/gene_synonym="caprin-1"
/gene_synonym="GPIP137"
/gene_synonym="p137GPI"
/db_xref="GeneID:4076"
/db_xref="HGNC:HGNC:6743"
/db_xref="MIM:601178"
CDS 190..2319
/gene="CAPRIN1"
/gene_synonym="caprin-1"
/gene_synonym="GPIP137"
/gene_synonym="p137GPI"
/codon_start=1
/product="cell cycle associated protein 1"
/protein_id="AAH01731.2"
/db_xref="GeneID:4076"
/db_xref="HGNC:HGNC:6743"
/db_xref="MIM:601178"
/translation="MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPAT
GTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEV
TNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLG
DDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLL
EGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAE
PEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAA
SPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSA
QPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQPLYQ
PSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSSGINV
NAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQEQL
QTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYYNSRGVSRGGSRGARGLMNG
YRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPRDYSGYQRDGYQQNFKRGSGQSG
PRGAPRGRGGPPRPNRGMPQMNTQQVN"
BASE COUNT 1037 a 807 c 790 g 843 t
ORIGIN
1 cagagggctg ctggctggct aagtccctcc cgctcccggc tctcgcctca ctaggagcgg
61 ctctcggtgc agcgggacag ggcgaagcgg cctgcgccca cggagcgcgc gacactgccc
121 ggaagggacc gccacccttg ccccctcagc tgcccactcg tgatttccag cggcctccgc
181 gcgcgcacga tgccctcggc caccagccac agcgggagcg gcagcaagtc gtccggaccg
241 ccaccgccgt cgggttcctc cgggagtgag gcggccgcgg gagccggggc cgccgcgccg
301 gcttctcagc accccgcaac cggcaccggc gctgtccaga ccgaggccat gaagcagatt
361 ctcggggtga tcgacaagaa acttcggaac ctggagaaga aaaagggtaa gcttgatgat
421 taccaggaac gaatgaacaa aggggaaagg cttaatcaag atcagctgga tgccgtttct
481 aagtaccagg aagtcacaaa taatttggag tttgcaaaag aattacagag gagtttcatg
541 gcactaagtc aagatattca gaaaacaata aagaagacag cacgtcggga gcagcttatg
601 agagaagaag ctgaacagaa acgtttaaaa actgtacttg agctacagta tgttttggac
661 aaattgggag atgatgaagt gcggactgac ctgaaacaag gtttgaatgg agtgccaata
721 ttgtccgaag aggagttgtc attgttggat gaattctata agctagtaga ccctgaacgg
781 gacatgagct tgaggttgaa tgaacagtat gaacatgcct ccattcacct gtgggacctg
841 ctggaaggga aggaaaaacc tgtatgtgga accacctata aagttctaaa ggaaattgtt
901 gagcgtgttt ttcagtcaaa ctactttgac agcacccaca accaccagaa tgggctgtgt
961 gaggaagaag aggcagcctc agcacctgca gttgaagacc aggtacctga agctgaacct
1021 gagccagcag aagagtacac tgagcaaagt gaagttgaat caacagagta tgtaaataga
1081 cagttcatgg cagaaacaca gttcaccagt ggtgaaaagg agcaggtaga tgagtggaca
1141 gttgaaacgg ttgaggtggt aaattcactc cagcagcaac ctcaggctgc atccccttca
1201 gtaccagagc cccactcttt gactccagtg gctcaggcag atccccttgt gagaagacag
1261 cgagtacaag accttatggc acaaatgcag ggtccctata atttcataca ggattcaatg
1321 ctggattttg aaaatcagac acttgatcct gccattgtat ctgcacagcc tatgaatcca
1381 acacaaaaca tggacatgcc ccagctggtt tgccctccag ttcattctga atctagactt
1441 gctcagccta atcaagttcc tgtacaacca gaagcgacac aggttccttt ggtatcatcc
1501 acaagtgagg ggtacacagc atctcaaccc ttgtaccagc cttctcatgc tacagagcaa
1561 cgaccacaga aggaaccaat tgatcagatt caggcaacaa tctctttaaa tacagaccag
1621 actacagcat catcatccct tcctgctgcg tctcagcctc aagtatttca ggctgggaca
1681 agcaaacctt tacatagcag tggaatcaat gtaaatgcag ctccattcca atccatgcaa
1741 acggtgttca atatgaatgc cccagttcct cctgttaatg aaccagaaac tttaaaacag
1801 caaaatcagt accaggccag ttataaccag agcttttcta gtcagcctca ccaagtagaa
1861 caaacagagc ttcagcaaga acagcttcaa acagtggttg gcacttacca tggttcccca
1921 gaccagtccc atcaagtgac tggtaaccac cagcagcctc ctcagcagaa cactggattt
1981 ccacgtagca atcagcccta ttacaatagt cgtggtgtgt ctcgtggagg ctcccgtggt
2041 gctagaggct tgatgaatgg ataccggggc cctgccaatg gattcagagg aggatatgat
2101 ggttaccgcc cttcattctc taacactcca aacagtggtt atacacagtc tcagttcagt
2161 gctccccggg attactctgg ctatcaacgg gatggatatc agcagaattt caagcgaggc
2221 tctgggcaga gtggaccacg gggagcccca cgaggtcgtg gagggccccc aagacccaac
2281 agagggatgc cgcaaatgaa cactcagcaa gtgaattaat ctgattcaca ggattatgtt
2341 taatcgccaa aaacacactg gccagtgtac cataatatgt taccagaaga gttattatct
2401 atttgttctc cctttcagga aacttattgt aaagggactg ttttcatccc ataaagacag
2461 gactacaatt gtcagctttc tattacctgg atatggaagg aaactatttt tactctgcat
2521 gttctgtcct aagcgtcatc ttgagccttg cacatgatac tcagattcct cacccttgct
2581 taggagtaaa acaatatact ttacagggtg ataataatct ccatagttat ttgaagtggc
2641 ttgaaaaagg caagattgac ttttatgaca ttggataaaa tctacaaatc agccctcgag
2701 ttattcaatg ataactgaca aactaaatta tttccctaga aaggaagatg aaaggagtgg
2761 agtgtggttt ggcagaacaa ctgcatttca cagcttttcc agttaaattg gagcactgaa
2821 cgttcagatg cataccaaat tatgcatggg tcctaatcac acatataagg ctggctacca
2881 gctttgacac agcactgttc atctggccaa acaactgtgg ttaaaaacac atgtaaaatg
2941 ctttttaaca gctgatactg tataagacaa agccaagatg caaaattagg ctttgattgg
3001 cactttttga aaaatatgca acaaatatgg gatgtaatcc ggatggccgc ttctgtactt
3061 aatgtgaaat atttagatac ctttttgaac acttaacagt ttctttgaga caatgacttt
3121 tgtaaggatt ggtactatct atcattcctt atgacatgta cattgtctgt cactaatcct
3181 tggattttgc tgtattgtca cctaaattgg tacaggtact gatgaaaatc tctagtggat
3241 aatcataaca ctctcggtca catgtttttc cttcagcttg aaagcttttt tttaaaagga
3301 aaagatacca aatgcctgct gctaccaccc ttttcaattg ctatcttttg aaaggcacca
3361 gtatgtgttt tagattgatt tccctgtttc agggaaatca cggacagtag tttcagttct
3421 gatggtataa gcaaaacaaa taaaacgttt ataaaagtta aaaaaaaaaa aaaaaaa
//