LOCUS BC001729 2226 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens asparagine-linked glycosylation 12,
alpha-1,6-mannosyltransferase homolog (S. cerevisiae), mRNA (cDNA
clone MGC:3136 IMAGE:3353085), complete cds.
ACCESSION BC001729
VERSION BC001729.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2226)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2226)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57165413.
FEATURES Location/Qualifiers
source 1..2226
/db_xref="H-InvDB:HIT000030608"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3136 IMAGE:3353085"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2226
/gene="ALG12"
/gene_synonym="ECM39"
/gene_synonym="hALG12"
/gene_synonym="PP14673"
/db_xref="GeneID:79087"
/db_xref="HGNC:HGNC:19358"
/db_xref="MIM:607144"
CDS 122..1588
/gene="ALG12"
/gene_synonym="ECM39"
/gene_synonym="hALG12"
/gene_synonym="PP14673"
/codon_start=1
/product="asparagine-linked glycosylation 12,
alpha-1,6-mannosyltransferase homolog (S. cerevisiae)"
/protein_id="AAH01729.1"
/db_xref="GeneID:79087"
/db_xref="HGNC:HGNC:19358"
/db_xref="MIM:607144"
/translation="MAGKGSSGRRPLLLGLLVAVATVHLVICPYTKVEESFNLQATHD
LLYHWQDLEQYDHLEFPGVVPRTFLGPVVIAVFSSPAVYVLSLLEMSKFYSQLIVRGV
LGLGVIFGLWTLQKEVRRHFGAMVATMFCWVTAMQFHLMFYCTRTLPNVLALPVVLLA
LAAWLRHEWARFIWLSAFAIIVFRVELCLFLGLLLLLALGNRKVSVVRALRHAVPAGI
LCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGCSL
LFIPLGLVDRRTHAPTVLALGFMALYSLLPHKELRFIIYAFPMLNITAARGCSYLLNN
YKKSWLYKAGSLLVIGHLVVNAAYSATALYVSHFNYPGGVAMQRLHQLVPPQTDVLLH
IDVAAAQTGVSRFLQVNSAWRYDKREDVQPGTGMLAYTHILMEAAPGLLALYRDTHRV
LASVVGTTGVSLNLTQLPPFNVHLQTKLVLLERLPRPS"
BASE COUNT 454 a 688 c 629 g 455 t
ORIGIN
1 ccaggcagcc gcgcttcgaa ggacgccgcc gggagctgcg gagcatgcgt ggagtggcag
61 tgctaacggc tggtgtctcg cactgttggc ctgtgaaggt acgtgaagct gaaagcctgg
121 aatggctgga aaggggtcat caggcaggcg gcccctgctg ctggggctgc tggtggccgt
181 agccactgtc cacctggtca tctgtcccta caccaaagtg gaggagagct tcaacctgca
241 ggccacacat gacctgctct accactggca agacctggag cagtacgacc atcttgagtt
301 ccccggagtc gtccccagga cgttcctcgg gccagtggtg atcgcagtgt tctccagccc
361 cgcggtttac gtgctttcgc tgttagaaat gtccaagttt tactctcagc taatagttag
421 aggagtgctt ggactcggcg tgatttttgg actctggacg ttacaaaagg aagtgagacg
481 gcacttcggg gccatggtgg ccaccatgtt ctgctgggtg acggccatgc agttccacct
541 gatgttctac tgcacgcgga cactgcccaa tgtgctggcc ctgcctgtag tcctgctggc
601 cctcgcggcc tggctgcggc acgagtgggc ccgcttcatc tggctgtcag ccttcgccat
661 catcgtgttc agggtggagc tgtgcctgtt cctgggcctc ctgctgctgc tggccttggg
721 caaccgaaag gtttctgtag tcagagccct tcgccacgcc gtcccggcag ggatcctctg
781 tttaggactg acggttgctg tggactctta tttttggcgg cagctcactt ggccggaagg
841 aaaggtgctt tggtacaaca ctgtcctgaa caaaagctcc aactggggga cctccccgct
901 gctgtggtac ttctactcag ccctgccccg cggcctgggc tgcagcctgc tcttcatccc
961 cctgggcttg gtagacagaa ggacgcacgc gccgacggtg ctggcactgg gcttcatggc
1021 actctactcc ctcctgccac acaaggagct acgcttcatc atctatgcct tccccatgct
1081 caacatcacg gctgccagag gctgctccta cctgctgaat aactataaaa agtcttggct
1141 gtacaaagcg gggtctctgc ttgtgatcgg acacctcgtg gtgaatgccg cctactcagc
1201 cacggccctg tatgtgtccc atttcaacta cccaggtggc gtcgcaatgc agaggctgca
1261 ccagctggtg cccccccaga cagacgtcct tctgcacatt gacgtggcag ccgcccagac
1321 aggtgtgtct cggtttctcc aagtcaacag cgcctggagg tacgacaaga gggaggatgt
1381 gcagccgggg acaggcatgc tggcatacac acacatcctc atggaggcgg cccctgggct
1441 cctggccctc tacagggaca cacaccgggt cctggccagc gtcgtgggga ccacaggtgt
1501 gagtctgaac ctgacccaac tgcccccctt caacgtccac ctgcagacaa agctggtgct
1561 tctggagagg ctcccccggc cgtcctgagg gggaccaggc agccctcagc agccacaggc
1621 cttccaggag ctgttatcac taccagtttc tggcacaatt ccagcacaat tatgacaatt
1681 cagagaagca agtcaaagga ctgggcacct gcctctgaca gacaccagac caggtccagg
1741 gcctcctcca cagcctcagc tggggctctc agcaccaaag aacgaggggc ccaggtcttg
1801 ttggcacccc gggagccact gcccagggtg atggtggcca gctcagggct tcctgcgggt
1861 gactgtcgcc cagaccaggt gccattcatg actaatcagg agcagcgggc tcacccaggc
1921 acctgtctgc caggaggcca cgtgtgtcct gcccacccag ggggagctgt attttggcag
1981 caccccacgc ttgctgcccg agggcctctt ggggcaccta agacagcacc ccctctcagg
2041 ggagaccatg gtggccccgg ccgcaccccc ccaccctggt gccaccactg caacttttgt
2101 attcacaggc atcccatctc catcacagat aaaatcttag gagataaaca cattcaaaaa
2161 ggaatgagat aaaaagaata aggcaataaa tgttgattgg aacctctcaa aaaaaaaaaa
2221 aaaaaa
//