LOCUS BC001682 1349 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens neugrin, neurite outgrowth associated, mRNA (cDNA
clone MGC:2824 IMAGE:2964457), complete cds.
ACCESSION BC001682
VERSION BC001682.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1349)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1349)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001682.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574506.
FEATURES Location/Qualifiers
source 1..1349
/db_xref="H-InvDB:HIT000030574"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2824 IMAGE:2964457"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1349
/gene="NGRN"
/gene_synonym="DSC92"
/gene_synonym="NEUGRIN"
/db_xref="GeneID:51335"
CDS 249..908
/gene="NGRN"
/gene_synonym="DSC92"
/gene_synonym="NEUGRIN"
/codon_start=1
/product="NGRN protein"
/protein_id="AAH01682.1"
/db_xref="GeneID:51335"
/translation="MEAPGAPPRTLTWEAMEQIRYLHEEFPESWSVPRLAEGFDVSTD
VIRRVLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLL
MPGHEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPR
ELQKYSSDSESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNFLYR
I"
BASE COUNT 380 a 299 c 342 g 328 t
ORIGIN
1 gtttagagag ttcggcatgc ttacaggcag ttattgttct aggtgttcag ctccccggga
61 ccactggtcc cttcattagt gacgtatttc atcatcaaag agaagagggc tgggcgctcc
121 atgatttagc ctgaggctct tcaaacatcc attctacatc cacgcatggc ttctgccatt
181 ggttctcttc ccccagcacc ctgaaacgac agaaacaagc aatccgattc cagaaaattc
241 ggaggcaaat ggaggcgcct ggtgccccgc ccaggaccct gacgtgggaa gccatggagc
301 agatacggta tttacatgag gaatttccag agtcctggtc agttcccagg ttggctgaag
361 gctttgatgt cagcactgat gtgatccgaa gagttttaaa aagcaagttt ttacccacat
421 tggagcagaa gctgaagcag gatcaaaaag tccttaagaa agctgggctt gcccactcgc
481 tgcagcacct ccggggctct ggaaatacct caaagctgct ccctgcaggc cactctgtat
541 caggctcttt gcttatgcca gggcatgaag cctcatctaa agacccaaat cacagcacag
601 ctttgaaagt gatagagtca gacactcaca ggacaaatac accaaggaga aggaagggaa
661 gaaataaaga aatccaggac ctggaggaga gctttgtgcc tgttgctgca cccctaggtc
721 atccaagaga gctgcagaag tactccagtg attctgagag ccccagagga actggcagtg
781 gtgcgttgcc aagtggtcag aagctggagg agttgaaggc agaggagcca gataacttca
841 gcagcaaagt agtgcagagg ggccgagagt tctttgacag caacgggaac ttcctgtaca
901 gaatttgagt cggggcttgg cttatggaga tgcctcgtga aacacagctg ggcaagtatt
961 aatgtatatg gaacagcctg gatttctgca tatggataag ccaccttgga ataggaagag
1021 gtgttgagcc tggactggga ggaaagagct gcgtggatag attcaaactt cctgtggtag
1081 tgctcccagt ctgacctctg tagaccttca gtactcactc ttcttgctta ggctctctgt
1141 gtgttgaaag ccatcccgtg ttgcatgtgt tgttacaatt ttctgtgata cttgcaattt
1201 atgtttgaga agaagtgaaa agtttgcctt ctgacctcat ttccttcttg atcagtgaac
1261 actaacattt tggggacaac ttagtcaatt ggttttcctt acaacaaaat aaagtaaaat
1321 gtagcaaaaa aaaaaaaaaa aaaaaaaaa
//