LOCUS BC001670 2959 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens Friend leukemia virus integration 1, mRNA (cDNA clone MGC:2252 IMAGE:2989507), complete cds. ACCESSION BC001670 VERSION BC001670.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2959) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2959) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: i Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7110592. FEATURES Location/Qualifiers source 1..2959 /db_xref="H-InvDB:HIT000030564" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2252 IMAGE:2989507" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2959 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /db_xref="GeneID:2313" /db_xref="MIM:193067" CDS 124..1482 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /codon_start=1 /product="FLI1 protein" /protein_id="AAH01670.1" /db_xref="GeneID:2313" /db_xref="MIM:193067" /translation="MDGTIKEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQ PHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVSKCSKLVGGGESNPMNY NSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQ NMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKE DPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANP GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDK LSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYH AHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPNTHVPSHLGS YY" misc_feature 463..717 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /note="SAM_PNT; Region: SAM / Pointed domain" /db_xref="CDD:smart00251" misc_feature 961..1212 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /note="Ets; Region: Ets-domain" /db_xref="CDD:pfam00178" BASE COUNT 885 a 689 c 663 g 722 t ORIGIN 1 cacgcaggga gggcccaggg cgccagggag gccgcgccgg gctaatccga aggggctgcg 61 aggtcaggct gtaaccgggt caatgtgtgg aatattgggg ggctcggctg cagacttggc 121 caaatggacg ggactattaa ggaggctctg tcggtggtga gcgacgacca gtccctcttt 181 gactcagcgt acggagcggc agcccatctc cccaaggccg acatgactgc ctcggggagt 241 cctgactacg ggcagcccca caagatcaac cccctcccac cacagcagga gtggatcaat 301 cagccagtga gggtcaacgt caagcgggag tatgaccaca tgaatggatc cagggagtct 361 ccggtggact gcagcgttag caaatgcagc aagctggtgg gcggaggcga gtccaacccc 421 atgaactaca acagctatat ggacgagaag aatggccccc ctcctcccaa catgaccacc 481 aacgagagga gagtcatcgt ccccgcagac cccacactgt ggacacagga gcatgtgagg 541 caatggctgg agtgggccat aaaggagtac agcttgatgg agatcgacac atcctttttc 601 cagaacatgg atggcaagga actgtgtaaa atgaacaagg aggacttcct ccgcgccacc 661 accctctaca acacggaagt gctgttgtca cacctcagtt acctcaggga aagttcactg 721 ctggcctata atacaacctc ccacaccgac caatcctcac gattgagtgt caaagaagac 781 ccttcttatg actcagtcag aagaggagct tggggcaata acatgaattc tggcctcaac 841 aaaagtcctc cccttggagg ggcacaaacg atcagtaaga atacagagca acggccccag 901 ccagatccgt atcagatcct gggcccgacc agcagtcgcc tagccaaccc tggaagcggg 961 cagatccagc tgtggcaatt cctcctggag ctgctctccg acagcgccaa cgccagctgt 1021 atcacctggg aggggaccaa cggggagttc aaaatgacgg accccgatga ggtggccagg 1081 cgctggggcg agcggaaaag caagcccaac atgaattacg acaagctgag ccgggccctc 1141 cgttattact atgataaaaa cattatgacc aaagtgcacg gcaaaagata tgcttacaaa 1201 tttgacttcc acggcattgc ccaggctctg cagccacatc cgaccgagtc gtccatgtac 1261 aagtaccctt ctgacatctc ctacatgcct tcctaccatg cccaccagca gaaggtgaac 1321 tttgtccctc cccatccatc ctccatgcct gtcacttcct ccagcttctt tggagccgca 1381 tcacaatact ggacctcccc cacgggggga atctacccca accccaacgt cccccgccat 1441 cctaacaccc acgtgccttc acacttaggc agctactact agaagcttac tcatcagtgg 1501 ccttctagct gaagcccatc ctgcacactt actggatgct ttggactcaa caggacatat 1561 gtggccttga agggaagaca aaactggatg ttctttcttg ttggatagaa cctttgtatt 1621 tgttctttaa aaacattttt tttaatgttg gtaacttttg cttcctctac ctgaacaaag 1681 agatgaataa ttccatgggc cagtatgcca gtttgaattc tcagtctcct agcatcttgt 1741 gagttgcata ttaagattac tggaatggtt aagtcatggt tctgagaaag aagctgtacg 1801 ttttctttat gtttttatga ccaaagcagt tccttgtcaa tacacggggt tcagtatgac 1861 acagaatcat ggacttaacc cgtcatgttc tggtttgaga tttagtgaca aatagaggtg 1921 ggaagcttat aatctaattt taggaggacc aaattcagtg gatggcaact ggaacattga 1981 ttgtaaggcc agtgaagttt tcacccaact ggaatttgat ggaaagaagg tttgtgtgtt 2041 taagacgcca agggcattgc agaatccctc tcagtggaca gtatgcactc agctgaccac 2101 tctctctaga aatagtcaag atatgaacta agaaatttta atgcaaatac atacattcct 2161 gaaagacggg gaattaaatt actaattttt ttttttttta aatgatgaca gtggtcccag 2221 aacttggaaa agttgtaggg atttctaaac tcaagcagat tcgcaagtgc tgtgcgcttg 2281 tcagaccatc agaccagggc caaccaatca gaaggcaact tactgtataa attatgcaga 2341 gttattttcc tatatctcac agtattaaaa ataaataatt aaaaattaag aataaataaa 2401 cgagttgacc tcggtcacaa aagcagtttt actatcgaat caatcgctgt tatttttttt 2461 aatgtaattt gtacatcttt tttcaatctg tacatttggg ctgtctgtat gtttttatag 2521 ctggttttta aaaagcataa tatgcctata gctgaaaagg aaacagggct gtttaagtca 2581 ctgacttatg agaaagcaaa gcactggtac agttatttaa caggcataca caagcaggga 2641 aaagataatc catttagatc tttaatgctt tggaaatgcg tgtaacagta ctgcaataat 2701 cacagctctg ggaaaaacaa cgaaactttc ccttgtggag aggagggatt ttcctgctct 2761 atataagcaa catattttta gacattaaaa tatatataat tttgcaggta attgttgact 2821 tttttaacta tattaagtgt taagctgaca actgtcaaag aagaccatgt tgtaaaataa 2881 tttgactaaa taaatggttc cttctctcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2941 aaaaaaaaaa aaaaaaaaa //