LOCUS BC001665 2793 bp mRNA linear HUM 03-FEB-2004 DEFINITION Homo sapiens actin binding LIM protein family, member 3, mRNA (cDNA clone MGC:1835 IMAGE:2988043), complete cds. ACCESSION BC001665 VERSION BC001665.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2793) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2793) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001665.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: j Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7662329. FEATURES Location/Qualifiers source 1..2793 /db_xref="H-InvDB:HIT000030559" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1835 IMAGE:2988043" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2793 /gene="ABLIM3" /gene_synonym="KIAA0843" /db_xref="GeneID:22885" CDS 276..1910 /gene="ABLIM3" /gene_synonym="KIAA0843" /codon_start=1 /product="ABLIM3 protein" /protein_id="AAH01665.1" /db_xref="GeneID:22885" /translation="MNTSIPYQQNPYNPRGSSNVIQCYRCGDTCKGEVVRVHNNHFHI RCFTCQVCGCGLAQSGFFFKNQEYICTQDYQQLYGTRCDSCRDFITGEVISALGRTYH PKCFVCSLCRKPFPIGDKVTFSGKECVCQTCSQSMASSKPIKIRGPSHCAGCKEEIKH GQSLLALDKQWHVSCFKCQTCSVILTGEYISKDGVPYCESDYHAQFGIKCETCDRYIS GRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRT SETSISPPGSSIGSPNRVICDIYENLDLRQRRASSPGYIDSPTYSRQGMSPTFSRSPH HYYRSGDLSTATKSKTSEDISQTSKYSPIYSPDPYYASESEYWTYHGSPKVPRARRFS SGGEEDDFDRSMHKLQSGIGRLILKEEMKARSSSYADPWTPPRSSTSSREALHTAGYE MSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADLFHYDSMNAVNWGMREYK IYPYELLLVTTRGRNRLPKDVDRTRLEGNFWKSGCL" misc_feature 342..512 /gene="ABLIM3" /gene_synonym="KIAA0843" /note="LIM; Region: LIM domain. This family represents two copies of the LIM structural domain" /db_xref="CDD:pfam00412" misc_feature 516..674 /gene="ABLIM3" /gene_synonym="KIAA0843" /note="LIM; Region: Zinc-binding domain present in Lin-11, Isl-1, Mec-3. Zinc-binding domain family. Some LIM domains bind protein partners via tyrosine-containing motifs. LIM domains are found in many key regulators of developmental pathways" /db_xref="CDD:smart00132" misc_feature 726..896 /gene="ABLIM3" /gene_synonym="KIAA0843" /note="LIM; Region: LIM domain. This family represents two copies of the LIM structural domain" /db_xref="CDD:pfam00412" BASE COUNT 724 a 752 c 731 g 586 t ORIGIN 1 caatctgagg agcaggagga ccggggcgcc ggtgtcctgc cgcctccttc tccttgctct 61 cacctgcgcc tattagtcca cgcgccttca aggccagggg ctacagccca gacagagagg 121 ggacagcaga gggagagaga gcacctgagg atacagagct ggcactggac tgccttttca 181 ccccccaggt gatgagtgag gttcgaagaa cggaagattt aaaaagcagc cggggcctcc 241 gtattgaatg aaagacccag tgcaaagaca tcaccatgaa cactagcatt ccttatcagc 301 agaatcctta caatccacgg ggcagctcca atgtcatcca gtgctaccgc tgtggagaca 361 cctgcaaagg ggaagtggtc cgcgtgcaca acaaccactt ccacatcaga tgcttcacct 421 gtcaagtatg tggctgtggc ctggcccagt caggcttctt cttcaagaac caggagtaca 481 tctgcaccca ggactaccag caactctatg gcacccgctg tgacagctgc cgggacttca 541 tcacaggcga agtcatctcg gccctgggcc gcacttacca ccccaagtgc ttcgtgtgca 601 gcttgtgcag gaagcctttc cccattggag acaaggtgac cttcagcggt aaagaatgtg 661 tgtgccaaac gtgctcccag tccatggcca gcagtaagcc catcaagatt cgtggaccaa 721 gccactgtgc cgggtgcaag gaggagatca agcacggcca gtcactcctg gctctggaca 781 agcagtggca cgtcagctgc ttcaagtgcc agacctgcag cgtcatcctc accggggagt 841 atatcagcaa ggatggtgtt ccatactgtg agtccgacta ccatgcccag tttggcatta 901 aatgtgagac ttgtgaccga tacatcagtg gcagagtctt ggaggcagga gggaagcact 961 accacccaac ctgtgccagg tgtgtacgct gccaccagat gttcaccgaa ggagaggaaa 1021 tgtacctcac aggttccgag gtttggcacc ccatctgcaa acaggcagcc cgggcagaga 1081 agaagttaaa gcatagacgg acatctgaaa cctccatctc accccctgga tccagcattg 1141 ggtcacccaa ccgagtcatc tgcgacatct acgagaacct ggacctccgg cagagacggg 1201 cctccagccc ggggtacata gactccccca cctacagccg gcagggcatg tcccccacct 1261 tctcccgctc acctcaccac tactaccgct ctggtgattt gtctacagca accaagagca 1321 aaacaagtga agacatcagc cagacctcca agtacagtcc catctactcg ccagacccct 1381 actatgcttc ggagtctgag tactggacct accatgggtc ccccaaagtg ccccgagcca 1441 gaaggttctc gtctggagga gaggaggatg attttgaccg cagcatgcac aagctccaaa 1501 gtggaattgg ccggctgatt ctgaaggaag aaatgaaggc ccggtcgagc tcctatgcag 1561 atccctggac ccctccccgg agctccacca gcagccggga agccctgcac acagctggct 1621 atgagatgtc cctcaatggc tcccctcggt cgcactacct ggctgacagt gatcctctca 1681 tctccaaatc tgcctccctg cctgcctacc gaagaaatgg gctgcacagg acacccagcg 1741 cagacctctt ccactacgac agcatgaacg cagtcaactg gggcatgcga gagtacaaga 1801 tctaccctta tgaactgctg ctggtgacta caagaggaag aaaccgactg cccaaggatg 1861 tagacaggac ccgtttagag ggaaactttt ggaagagtgg ctgcttatga gattccaaaa 1921 tgaagtgttg gccaacaccg ctcatggcca tcctggattt tcccagtggc ttcccttcct 1981 gctcgcctcc ctgaacaggg gagaaagctt aacctctctt ctcctctcca aacctttcac 2041 cttgaatggg taatgtttgg tgggggctgt tccttcttgg agaagccttg agtcggacca 2101 ttttgagatc atggaggaag gatgaagaag tgaaaatgac aataatgact ctcaagaggc 2161 tggcgatgtg acatggcaaa tgtagaactg acttaaattg aacaaaccct cactgagcac 2221 ctctgatgtt gagcacctgc tgaatactga gcactgaatg ggggaggggg aggggagcac 2281 ggggtgagtc aacctgggac tcggtctcag ggatatgcct accaatagcg ggtatcgtaa 2341 ggcatgtacc caaacataac ggatgtaagg cagaaagtga tcggagaagg aatgagaaag 2401 tgtgcgtgat gttaatgaaa agtcatatgc agctagagca gacccaggaa agctttctgg 2461 aagagattgc atctgaggaa attcaggaag gatctttgta gattgggggg agattctaaa 2521 ttgaaggggt gatggggtga ggggccagag ggaagtctgc tgtgttctca tgtaggatgt 2581 cagccctccc tgcaacttct ctttttggcc aatgtctttt cactttcctg accctttaga 2641 atcatcccca gccagacgca atcatggaag ttgccttatt gtcactggtt aagaacttgg 2701 cgagattgaa gggcttttgt tattgttgtt ggatattttt gtttcccata aaagcacatc 2761 atttcaaccc taaaaaaaaa aaaaaaaaaa aaa //