LOCUS BC001622 1859 bp mRNA linear HUM 24-JUN-2004
DEFINITION Homo sapiens THUMP domain containing 3, mRNA (cDNA clone MGC:930
IMAGE:3355978), complete cds.
ACCESSION BC001622
VERSION BC001622.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1859)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1859)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149689.
FEATURES Location/Qualifiers
source 1..1859
/db_xref="H-InvDB:HIT000030524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:930 IMAGE:3355978"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1859
/gene="THUMPD3"
/gene_synonym="DKFZP434F091"
/db_xref="GeneID:25917"
CDS 128..1651
/gene="THUMPD3"
/gene_synonym="DKFZP434F091"
/codon_start=1
/product="THUMPD3 protein"
/protein_id="AAH01622.1"
/db_xref="GeneID:25917"
/translation="MCDIEEATNQLLDVNLHENQKSVQVTESDLGSESELLVTIGATV
PTGFEQTAADEVREKLGSSCKISRDRGKIYFVISVESLAQVHCLRSVDNLFVVVQEFQ
DYQFKQTKEEVLKDFEDLAGKLPWSNPLKVWKINASFKKKKAKRKKINQNSSKEKINN
GQEVKIDQRNVKKEFTSHALDSHILDYYENPAIKEDVSTLIGDDLASCKDETDESSKE
ETEPQVLKFRVTCNRAGEKHCFTSNEAARDFGGAVQDYFKWKADMTNFDVEVLLNIHD
NEVIVGIALTEESLHRRNITHFGPTTLRSTLAYGMLRLCDPLPYDIIVDPMCGTGAIP
IEGATEWSDCFHIAGDNNPLAVNRAANNIASLLTKSQIKEGKPSWGLPIDAVQWDICN
LPLRTGSVDIIVTDLPFGKRMGSKKRNWNLYPACLREMSRVCTPTTGRAVLLTQDTKC
FTKALSGMRHVWRKVDTVWVNVGGLRAAVYVLIRTPQAFVHPSEQDGERGTLWQCKE"
BASE COUNT 616 a 339 c 437 g 467 t
ORIGIN
1 ggcttccggc ggcgtgacct gaccgcaaga ggccaatgga gtgtgggagc tgaaagggtc
61 ttcgctggcg gccggacagt actgctttta aagagacagt gttagggatc ttggaagcac
121 agccaacatg tgtgacattg aagaagccac taaccaactc ctagatgtga accttcatga
181 gaaccagaag tctgtacaag tgacagaaag cgacctcgga agtgaatctg agcttctagt
241 cactattgga gccactgtac ctactggctt tgagcaaaca gctgcagatg aagtcagaga
301 gaaacttggg tcatcatgca aaatcagcag agaccgtggc aagatatatt ttgtcatttc
361 agtggaaagt ctggcacagg ttcattgtct gagatcagtt gataacttat ttgtggtggt
421 tcaggagttt caagattacc agttcaaaca aacaaaggaa gaagttctaa aggattttga
481 agacttggct ggaaaactcc catggtcaaa ccccttaaaa gtgtggaaaa ttaatgccag
541 ttttaaaaag aaaaaagcaa agcgcaaaaa gataaatcag aattcaagta aagagaagat
601 taataatgga caagaagtca aaatcgatca gagaaatgtt aaaaaagagt tcactagcca
661 tgctttagat tctcatatct tagattatta tgaaaatcca gccatcaaag aggatgtatc
721 aacattaata ggtgatgatt tggcatcttg caaagatgag actgatgaaa gctcaaaaga
781 agaaactgag cctcaagtgc tgaagtttag agtcacatgc aacagggcag gagagaaaca
841 ttgctttacc tcaaatgagg ctgcaagaga ttttgggggt gctgttcaag attattttaa
901 gtggaaggcc gacatgacca actttgatgt ggaggttctt ttgaacatcc atgataatga
961 agtcattgtg ggcattgcat tgactgaaga gagtctccac cgaagaaata taacacattt
1021 tggacctaca actcttagat caactcttgc ctatgggatg ctcaggctct gtgatcctct
1081 accttatgat ataatagtcg atccaatgtg tggaactggg gcaataccaa tagagggggc
1141 cactgaatgg tctgactgct tccatattgc tggtgataat aatccactgg ctgtgaatag
1201 agcagcaaat aacattgcat ctttattgac caagagccaa attaaagaag gcaaaccctc
1261 ctggggcttg cccatagatg ctgttcagtg ggatatctgc aatctgccat tgagaactgg
1321 ctctgtggat attattgtaa cagatttgcc atttggaaaa aggatgggat ccaagaaaag
1381 aaactggaac ctttatccag cttgcctacg ggagatgagc cgtgtctgca cacctaccac
1441 aggccgagct gtactactta ctcaagacac aaaatgcttt accaaggcgt tatctggaat
1501 gcgacacgta tggcgaaagg tggatacagt ctgggtgaac gttggtggtc ttcgtgctgc
1561 agtttacgtt ctgatacgta cacctcaagc ttttgttcat ccttcagaac aagacggaga
1621 aagaggaact ctttggcaat gcaaagaatg aagatgacta atagtacttg tacttcccac
1681 cactggaaat gttagcataa aagaacttgg agaggaaaaa agtattaaca aaactgcagt
1741 ctgcactctt taaacctgtt taaggctctt catcctggtt agcaaaaggt gtgaatgtaa
1801 tgtgatggaa tttaaaagtt ttatgagacc aggaaaaaaa aaaaaaaaaa aaaaaaaaa
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