LOCUS BC001619 3021 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens aldehyde dehydrogenase 1 family, member B1, mRNA (cDNA clone MGC:2230 IMAGE:3356389), complete cds. ACCESSION BC001619 VERSION BC001619.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3021) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3021) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: e Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25777729. FEATURES Location/Qualifiers source 1..3021 /db_xref="H-InvDB:HIT000030521" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2230 IMAGE:3356389" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3021 /gene="ALDH1B1" /gene_synonym="ALDHX" /gene_synonym="MGC2230" /db_xref="GeneID:219" /db_xref="HGNC:HGNC:407" /db_xref="MIM:100670" CDS 91..1644 /gene="ALDH1B1" /gene_synonym="ALDHX" /gene_synonym="MGC2230" /codon_start=1 /product="aldehyde dehydrogenase 1 family, member B1" /protein_id="AAH01619.1" /db_xref="GeneID:219" /db_xref="HGNC:HGNC:407" /db_xref="MIM:100670" /translation="MLRFLAPRLLSLQGRTARYSSAAALPSPILNPDIPYNQLFINNE WQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERG RLLNLLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKT IPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSA LYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGD SNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNE FLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFG ERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFT RDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTV TIKVPQKNS" BASE COUNT 757 a 752 c 793 g 719 t ORIGIN 1 gggcggccat gtggacagag ctgggagggc cggaaccaga acccaagcgt gatcctgaac 61 cggagcccga gcctgctgca gagtgtcagc atgctgcgct tcctggcacc ccggctgctt 121 agcctccagg gcaggaccgc ccgctactcc tcggcagcag ccctcccaag ccccattctg 181 aacccagaca tcccctacaa ccagctgttc atcaacaatg aatggcaaga tgcagtcagc 241 aagaagacct tcccgacggt caaccctacc accggggagg tcatcgggca cgtggctgaa 301 ggtgaccggg ctgatgtgga tcgggccgtg aaagcagccc gggaagcctt ccgcctgggg 361 tccccatggc gccggatgga tgcctctgag cggggccggc tgctgaacct cctggcagac 421 ctagtggagc gggatcgagt ctacttggcc tcactcgaga ccttggacaa tgggaagcct 481 ttccaagagt cttacgcctt ggacttggat gaggtcatca aggtgtatcg gtactttgct 541 ggctgggctg acaagtggca tggcaagacc atccccatgg atggccagca tttctgcttc 601 acccggcatg agcccgttgg tgtctgtggc cagatcatcc cgtggaactt ccccttggtc 661 atgcagggtt ggaaacttgc cccggcactc gccacaggca acactgtggt tatgaaggtg 721 gcagagcaga cccccctctc tgccctgtat ttggcctccc tcatcaagga ggcaggcttt 781 ccccctgggg tggtgaacat catcacgggg tatggcccaa cagcaggtgc ggccatcgcc 841 cagcacatgg atgttgacaa agttgccttc accggttcca ccgaggtggg ccacctgatc 901 cagaaagcag ctggcgattc caacctcaag agagtcaccc tggagctggg tggtaagagc 961 cccagcatcg tgctggccga tgctgacatg gagcatgccg tggagcagtg ccacgaagcc 1021 ctgttcttca acatgggcca gtgctgctgt gctggctccc ggaccttcgt ggaagaatcc 1081 atctacaatg agtttctcga gagaaccgtg gagaaagcaa agcagaggaa agtggggaac 1141 ccctttgagc tggacaccca gcaggggcct caggtggaca aggagcagtt tgaacgagtc 1201 ctaggctaca tccagcttgg ccagaaggag ggcgcaaaac tcctctgtgg cggagagcgt 1261 ttcggggagc gtggtttctt catcaagcct actgtctttg gtggcgtgca ggatgacatg 1321 agaattgcca aagaggagat ctttgggcct gtgcagcccc tgttcaagtt caagaagatt 1381 gaggaggtgg ttgagagggc caacaacacc aggtatggcc tggctgcggc tgtgttcacc 1441 cgggatctgg acaaggccat gtacttcacc caggcactcc aggccgggac cgtgtgggta 1501 aacacctaca acatcgtcac ctgccacacg ccatttggag ggtttaagga atctggaaac 1561 gggagggagc tgggtgagga tgggcttaag gcctacacag aggtaaagac ggtcaccatc 1621 aaggttcctc agaagaactc gtaagagcag ctgtcaggga ggcccagtca cagtccagca 1681 attccacaac caccttgacc aatgcttgcc aagctgtttt aaagccaaga acaccctttc 1741 tttgttccaa attaactctt agaagaaacc ccacaaataa agcaattcaa tcaaggctgt 1801 tctatttaaa tcagagatgg ggaccaggct cagagttcta cctatctaac ccccaaccac 1861 agcccccttg gtggcccatg agttgcttcc atgaaatctt aggagtctct ggaggacaga 1921 ttaaaaacca gtgatctgta atttgtagct cttcctgctg atccaaggac tttcccatgg 1981 gtgcgcttga tggtttagtg gatcgactca actcagaaca caagcttgga aagtgttagg 2041 ggttttgaac taggtggata ctaaatctcg gccccactct tcattggctt aacctaaaaa 2101 ccagaggtgc ttttccttgt ctgtgtgcca gttgctggct gttttagttg cttgcccttc 2161 attttgctac tgattttcct taatttgtgg gaaggagtag gcaaagaata tgcttacatg 2221 attacacctg taaagtaagc ccaaacatcc caaatgtcca tcaactgatg agtggattaa 2281 taaaatgttt ccatggaata ttccttggat tactcagcca taaaaaggaa tgaagtactg 2341 acacatgctg tgacatcagt gaaccctgaa aacatccttc tcagtgaaac aagccagaga 2401 gatgtacaag gctacagact gtatgattcc atttatatga aatatacata ctaggcaaat 2461 ccatggagat ggaacataga ttagtggttg ccaggggata gaggagtaat tgttagtggg 2521 catgggattt gtttttggga ggttttgaaa atgttctgga gttgaacaat agtaatggtt 2581 gcatgatttg gtaaaaatac taaaaactat ggaattgttt aattatggta tatgaattaa 2641 tttctttctt tttttctttt tttttttttt tttgacacgg agtctcactc tgtcgcccag 2701 gctggagtgc agtggtgtga tctcgtctca ctgcaacctc cgcctcccag attcaagcga 2761 ttctcctgtc tcagcctcct gagtagctgg gattataggt acatgccatc acacctggct 2821 aatttttgta tttttagtag agatgaggtt tcaccatttt ggccaggctg atcttgaact 2881 cctgacctca ggtgatccac ccgcctcagc ctcccaaagt gctgggatta caggtgggag 2941 ccacaacacc cgaccatgaa ttaactccgt taaaaaataa acgtatacat tctgtgagca 3001 aaaaaaaaaa aaaaaaaaaa a //