LOCUS BC001601 1286 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA
clone MGC:2031 IMAGE:3543589), complete cds.
ACCESSION BC001601
VERSION BC001601.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1286)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1286)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: i Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47524176.
FEATURES Location/Qualifiers
source 1..1286
/db_xref="H-InvDB:HIT000030508"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2031 IMAGE:3543589"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1286
/gene="GAPDH"
/gene_synonym="G3PD"
/db_xref="GeneID:2597"
/db_xref="HGNC:HGNC:4141"
/db_xref="MIM:138400"
CDS 55..1062
/gene="GAPDH"
/gene_synonym="G3PD"
/codon_start=1
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="AAH01601.1"
/db_xref="GeneID:2597"
/db_xref="HGNC:HGNC:4141"
/db_xref="MIM:138400"
/translation="MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMV
YMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVF
TTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPL
AKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVG
KVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGY
TEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASK
E"
BASE COUNT 319 a 382 c 325 g 260 t
ORIGIN
1 aattcgcacg aggcttcttt tgcgtcgcca gccgagccac atcgctcaga caccatgggg
61 aaggtgaagg tcggagtcaa cggatttggt cgtattgggc gcctggtcac cagggctgct
121 tttaactctg gtaaagtgga tattgttgcc atcaatgacc ccttcattga cctcaactac
181 atggtttaca tgttccaata tgattccacc catggcaaat tccatggcac cgtcaaggct
241 gagaacggga agcttgtcat caatggaaat cccatcacca tcttccagga gcgagatccc
301 tccaaaatca agtggggcga tgctggcgct gagtacgtcg tggagtccac tggcgtcttc
361 accaccatgg agaaggctgg ggctcatttg caggggggag ccaaaagggt catcatctct
421 gccccctctg ctgatgcccc catgttcgtc atgggtgtga accatgagaa gtatgacaac
481 agcctcaaga tcatcagcaa tgcctcctgc accaccaact gcttagcacc cctggccaag
541 gtcatccatg acaactttgg tatcgtggaa ggactcatga ccacagtcca tgccatcact
601 gccacccaga agactgtgga tggcccctcc gggaaactgt ggcgtgatgg ccgcggggct
661 ctccagaaca tcatccctgc ctctactggc gctgccaagg ctgtgggcaa ggtcatccct
721 gagctgaacg ggaagctcac tggcatggcc ttccgtgtcc ccactgccaa cgtgtcagtg
781 gtggacctga cctgccgtct agaaaaacct gccaaatatg atgacatcaa gaaggtggtg
841 aagcaggcgt cggagggccc cctcaagggc atcctgggct acactgagca ccaggtggtc
901 tcctctgact tcaacagcga cacccactcc tccacctttg acgctggggc tggcattgcc
961 ctcaacgacc actttgtcaa gctcatttcc tggtatgaca acgaatttgg ctacagcaac
1021 agggtggtgg acctcatggc ccacatggcc tccaaggagt aagacccctg gaccaccagc
1081 cccagcaaga gcacaagagg aagagagaga ccctcactgc tggggagtcc ctgccacact
1141 cagtccccca ccacactgaa tctcccctcc tcacagttgc catgtagacc ccttgaagag
1201 gggaggggcc tagggagccg caccttgtca tgtaccatca ataaagtacc ctgtgctcaa
1261 ccaaaaaaaa aaaaaaaaaa aaaaaa
//