LOCUS BC001553 2410 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromatin modifying protein 2B, mRNA (cDNA clone
MGC:5027 IMAGE:3460712), complete cds.
ACCESSION BC001553
VERSION BC001553.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2410)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2410)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254865.
FEATURES Location/Qualifiers
source 1..2410
/db_xref="H-InvDB:HIT000030488"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5027 IMAGE:3460712"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2410
/gene="CHMP2B"
/gene_synonym="CHMP2.5"
/gene_synonym="DKFZP564O123"
/gene_synonym="DMT1"
/gene_synonym="VPS2-2"
/db_xref="GeneID:25978"
/db_xref="HGNC:HGNC:24537"
/db_xref="MIM:609512"
CDS 77..718
/gene="CHMP2B"
/gene_synonym="CHMP2.5"
/gene_synonym="DKFZP564O123"
/gene_synonym="DMT1"
/gene_synonym="VPS2-2"
/codon_start=1
/product="chromatin modifying protein 2B"
/protein_id="AAH01553.1"
/db_xref="GeneID:25978"
/db_xref="HGNC:HGNC:24537"
/db_xref="MIM:609512"
/translation="MASLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLEL
EIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAM
STTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQ
DIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEIERQLKALGVD"
BASE COUNT 847 a 366 c 436 g 761 t
ORIGIN
1 gtccttttcc tcctgtcctt tgccagcgtt gggccggacc gggccgagcc gggccgcccg
61 ggcgcagtct ttaaccatgg cgtccctctt caagaagaaa accgtggatg atgtaataaa
121 ggaacagaat cgagagttac gaggtacaca gagggctata atcagagatc gagcagcttt
181 agagaaacaa gaaaaacagc tggaattaga aattaagaaa atggccaaga ttggtaataa
241 ggaagcttgc aaagttttag ccaaacaact tgtgcatcta cggaaacaga agacgagaac
301 ttttgctgta agttcaaaag ttacttctat gtctacacaa acaaaagtga tgaattccca
361 aatgaagatg gctggagcaa tgtctaccac agcaaaaaca atgcaggcag ttaacaagaa
421 gatggatcca caaaagacat tacaaacaat gcagaatttc cagaaggaaa acatgaaaat
481 ggaaatgact gaagaaatga tcaatgatac acttgatgac atctttgacg gttctgatga
541 cgaagaagaa agccaggata ttgtgaatca agttcttgat gaaattggaa ttgaaatttc
601 tggaaagatg gccaaagctc catcagctgc tcgaagctta ccatctgcct ctacttcaaa
661 ggctacaatc tcagatgaag agattgaacg gcaactcaag gctttaggag tagattagtc
721 aaaagaagtc atactatttt gcttacttat aattatgtag tataaaccaa gcacagtgca
781 gatttctttt acaaaacaca tgtattttgc aaaaaaaaaa aaaatgaaga ccatgagtga
841 acagttgttt cctaacccat ggctatttag aatcttttgc caaagaatga caatgatgca
901 aaaatgggaa cagtttggat tttaattaga actgtttagg agtgatgatg tgtaaaaagt
961 tgacttctct tttgcatggc acagagaaat tatattcctt acttcatgtc agtttatgtt
1021 ctaaatcttt ttcactgaat ataaaaatct tgttaaatgc cattaggcac caacttaaag
1081 agggttgtaa aaatattaaa agtatatcgt taattctgta tctgttgctt gtcttttgta
1141 agtgattatg tgttatgacc ataggtggtt acagctgcca aattattttt aaatggtcaa
1201 aaagaagagt gctatttaaa catctgtctt aaacaaaaac tgtcataact tttctttttt
1261 ctttttccat taggagaaca ttctagttgg taaatttcaa aatgtgcttg acacctgcct
1321 taaatagcac agacctattg tgcacatctt taaattattt cagctggcag aaaagaatta
1381 catttaaaac tgaaatcaag gcctcaatac aaagattatc ctggctcttt tctatctctg
1441 tgggcctaat tgaaatatgt actcttattt tagacacgcc tctgttaaaa cagaccaggt
1501 tttcctggtc tcagacctat gatgacttgt ccctttgatg tcactactgt gaattgaata
1561 taattagtaa aaatagacga tgaataaata acactttata gtaagaaaac aatatatttt
1621 ggccatctaa aaatgagaat tataattata tgaattataa tttaaactgt ttaattttgt
1681 ttaatgtgta tattgaatct tccaaattga agccattatt ctcaattaag tactacaact
1741 atgacaatgc ttgacctaca tttctaaaat aaaaattcac attttttgat aaataaacta
1801 cagttttacc agaaattact atctaaatgt gtattagcag tattttttaa ggtgaaattg
1861 ccttggtatc taatgaatgt gtagacaggg agataaaatg aaggattgcc agactagtta
1921 gaatagaatt taggattagg ttagttttga aaaatgatgt tgtaatatat gggttctaac
1981 acatcctacc ataaaaactg gaggagatat gtgtaacctg gttaatttgg gatggtggac
2041 attttgggct aatactgaca aaatacatct taggactagt atacatgtga cacggattgc
2101 taggaggaat gaaaaactaa actgtatagt ttatattccg taaaccattt tataatgttc
2161 aaagattagg ttttgttatt gatagtatta aatacacagt ttctcttaac agtgatgggt
2221 gaaaacattt taccggatta tggaatgttt accagaacat gttttgattc ttgaatgtac
2281 ataataatgc catctaactt atttacattc ttgtttacat gtgggagctt ttgttttcaa
2341 aaattatttt gttaaaaaat ctcaataaag atttattatt gttgttcttt tcttaaaaaa
2401 aaaaaaaaaa
//