LOCUS BC001539 1094 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dickkopf homolog 1 (Xenopus laevis), mRNA (cDNA clone
MGC:868 IMAGE:3508222), complete cds.
ACCESSION BC001539
VERSION BC001539.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1094)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1094)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001539.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676924.
FEATURES Location/Qualifiers
source 1..1094
/db_xref="H-InvDB:HIT000030480"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:868 IMAGE:3508222"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1094
/gene="DKK1"
/gene_synonym="DKK-1"
/gene_synonym="SK"
/db_xref="GeneID:22943"
/db_xref="HGNC:HGNC:2891"
/db_xref="MIM:605189"
CDS 140..940
/gene="DKK1"
/gene_synonym="DKK-1"
/gene_synonym="SK"
/codon_start=1
/product="dickkopf homolog 1 (Xenopus laevis)"
/protein_id="AAH01539.1"
/db_xref="GeneID:22943"
/db_xref="HGNC:HGNC:2891"
/db_xref="MIM:605189"
/translation="MMALGAAGATRVFVAMVAAALGGHPLLGVSATLNSVLNSNAIKN
LPPPLGGAAGHPGSAVSAAPGILYPGGNKYQTIDNYQPYPCAEDEECGTDEYCASPTR
GGDAGVQICLACRKRRKRCMRHAMCCPGNYCKNGICVSSDQNHFRGEIEETITESFGN
DHSTLDGYSRRTTLSSKMYHTKGQEGSVCLRSSDCASGLCCARHFWSKICKPVLKEGQ
VCTKHRRKGSHGLEIFQRCYCGEGLSCRIQKDHHQASNSSRLHTCQRH"
BASE COUNT 283 a 286 c 274 g 251 t
ORIGIN
1 ccctgcagtc aggactctgg gaccgcaggg ggctcccgga ccctgactct gcagccgaac
61 cggcacggtt tcgtggggac ccaggcttgc aaagtgacgg tcattttctc tttctttctc
121 cctcttgagt ccttctgaga tgatggctct gggcgcagcg ggagctaccc gggtctttgt
181 cgcgatggta gcggcggctc tcggcggcca ccctctgctg ggagtgagcg ccaccttgaa
241 ctcggttctc aattccaacg ctatcaagaa cctgccccca ccgctgggcg gcgctgcggg
301 gcacccaggc tctgcagtca gcgccgcgcc gggaatcctg tacccgggcg ggaataagta
361 ccagaccatt gacaactacc agccgtaccc gtgcgcagag gacgaggagt gcggcactga
421 tgagtactgc gctagtccca cccgcggagg ggacgcaggc gtgcaaatct gtctcgcctg
481 caggaagcgc cgaaaacgct gcatgcgtca cgctatgtgc tgccccggga attactgcaa
541 aaatggaata tgtgtgtctt ctgatcaaaa tcatttccga ggagaaattg aggaaaccat
601 cactgaaagc tttggtaatg atcatagcac cttggatggg tattccagaa gaaccacctt
661 gtcttcaaaa atgtatcaca ccaaaggaca agaaggttct gtttgtctcc ggtcatcaga
721 ctgtgcctca ggattgtgtt gtgctagaca cttctggtcc aagatctgta aacctgtcct
781 gaaagaaggt caagtgtgta ccaagcatag gagaaaaggc tctcatggac tagaaatatt
841 ccagcgttgt tactgtggag aaggtctgtc ttgccggata cagaaagatc accatcaagc
901 cagtaattct tctaggcttc acacttgtca gagacactaa accagctatc caaatgcagt
961 gaactccttt tatataatag atgctatgaa aaccttttat gaccttcatc aactcaatcc
1021 taaggatata caagttctgt ggtttcagtt aagcattcca ataacacctt ccaaaaaaaa
1081 aaaaaaaaaa aaaa
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