LOCUS BC001404 3200 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens SEC16 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:3139772), partial cds. ACCESSION BC001404 VERSION BC001404.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3200) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3200) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001404.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: e Column: 8. FEATURES Location/Qualifiers source 1..3200 /db_xref="H-InvDB:HIT000086004" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3139772" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..3200 /gene="SEC16A" /gene_synonym="p250" /gene_synonym="RP11-413M3.10" /gene_synonym="SEC16L" /db_xref="GeneID:9919" /db_xref="HGNC:HGNC:29006" CDS <1..1519 /gene="SEC16A" /gene_synonym="p250" /gene_synonym="RP11-413M3.10" /gene_synonym="SEC16L" /codon_start=2 /product="SEC16A protein" /protein_id="AAH01404.2" /db_xref="GeneID:9919" /db_xref="HGNC:HGNC:29006" /translation="SAFGDRPEKRDNNWRYDPRFTGSFDDDPDPHRDPYGEEVDRRSV HSEHSARSLHSAHSLASRRSSLSSHSHQSQIYRSHNVAAGSYEAPLPPGSFHGDFAYG TYRSNFSSGPGFPEYGYPALGFLEPSGPGLPPGVPPLQERRHLLQEARSPDPGIVPQE APVGNSLSELSEENFDGKFANLTPSRTVPDSEAPPGWDRADSGPTQPPLSLSPAPETK RPGQAAKKETKEPKKGESWFFRWLPGKKKTEAYLPDDKDKSIVWDEKKNQWVNLNEPE EEKKAPPPPPTSMPKTVQAAPPALPGPPGAPVNMYSRRAAGTRARYVDVLNPSGTQRS EPALAPADFVAPLAPLPIPSNLFVPTPVRPQGRSGRNDGLLALSSPDAEEPQLPDGTG REGPAAARGLANPEPAPEPKVLSSAASLPGSELPSSRPEGSQGGELSRCSSMSSLSRE VSQHFNQAPGDLPAAGGPPSGAMPFYNPAQLAQACATSGSSRLGRIGQRKHLVLN" BASE COUNT 738 a 902 c 827 g 733 t ORIGIN 1 ctctgccttc ggggacaggc ccgagaaacg tgacaacaac tggaggtacg atcctcgctt 61 cacggggagt tttgacgatg accccgatcc gcacagagac ccttatgggg aagaggtgga 121 ccggcgcagc gtccacagcg agcactcggc acggagcctg cacagcgcac acagcctggc 181 cagccgccgc agcagcctca gctcccactc gcaccagagt cagatttaca gaagccacaa 241 tgtggctgcc ggttcctacg aggccccgct tcctccaggc tcctttcacg gcgattttgc 301 ctacggcacc taccgcagca atttcagcag tggccccggc ttcccagagt atggctaccc 361 tgcacttggc ttcctggagc cctccgggcc tggcctccca cctggtgtgc cacctctgca 421 ggaaaggaga cacttgctcc aggaagccag gagcccagac ccagggatag tgccgcagga 481 ggcgcctgtt ggaaactcac tttccgagct aagcgaagaa aattttgatg gaaaatttgc 541 taatctgacc ccctcgagga cggtgccaga ctcggaggcc cccccagggt gggatcgtgc 601 cgactcgggt cccacgcagc cacctctgtc tctctcaccc gctcccgaaa caaagagacc 661 cggacaggca gccaagaaag aaacgaagga acctaagaag ggtgaatcct ggttctttcg 721 ttggctacct ggaaagaaaa agacagaagc ttatttgcca gatgacaagg acaaatcgat 781 tgtttgggat gaaaagaaaa accagtgggt gaatttaaat gagccagaag aggagaagaa 841 agccccgccc ccacctccaa cctcgatgcc caagactgtg caagctgccc cgcctgccct 901 cccagggcct cctggagccc ccgtgaacat gtactctaga agagcagcag gaaccagagc 961 tcgctacgtt gacgtcctga acccaagcgg gacccagcgg agcgagccgg ctctcgctcc 1021 tgcggacttt gtcgctccac tcgcgccact cccaattcct tctaacttgt tcgtgccaac 1081 cccagtgaga ccccagggac gttcgggacg gaatgatggc ctcctcgctc tctcatcccc 1141 agatgcagaa gaaccacagc ttccagacgg gactggcagg gaagggcctg cagcagctag 1201 gggcctggcc aatccagagc ctgccccaga gcccaaggtt ttaagctctg cagcgtcact 1261 ccctggctct gaactcccct cctccaggcc tgagggttcc cagggaggag agctttcgcg 1321 ctgtagttca atgagttcat tatcacgtga agtgagccag cattttaatc aggctcctgg 1381 cgacctccct gctgcagggg gccctcccag cggggccatg cccttctaca accctgctca 1441 gctggcacag gcctgcgcca cctccgggag ctcaaggcta gggaggattg gccagaggaa 1501 gcacctggtg ctgaactagg cttgccctgc tgtgaacttg cacttggagc cctgacgctg 1561 ctgttctccc cgaagaaccc aaccgacctc cgcgatctcc gtcccgcccc cagggagaca 1621 cagcagtgac tcagagctgg tcgcacactg tgcctccctc ctcaccgccc atcgtaatga 1681 attattttga aaattaattc caccatcctt tcagattctg gatggaaaga ctgaatcttt 1741 gactcagaat tgtttgccga aaagaatgat gtgactttct tagtcattta ggatgattta 1801 aggatatagt attcctggtc atttaagaat gttcattcat tgaagccgga gctgtctctg 1861 ccacaggaga gccacatggt cggtagtaac cagggcctct ccaagcccag ctgtgagtca 1921 ctgcccagtg agtcccgcgc ttcctttaag gtgctgggag caaagagagg gtgactgagg 1981 cagaccccaa cccctgctct gcaccatctg ggccctcgcc gtgtttgaac ctggctgaat 2041 gagtggaggg cgctgtgttc tcaatcagcg cctccgagga gccgtggggt tccttcggca 2101 ttagttcacg gtttttgaga gaggccttag ttactgcagt gaatttcttt cctgttgcaa 2161 agacgcttcc agcctcactt tactttctgt ggcctgatga ggaccatggg tgattttgtg 2221 tacccaaagc gctggggact gcccaccgtg tggcccagtc actgggaagg agccccagag 2281 agccggctgt ctgacatgat ggctcagggt ggtcatccag gttgaaaact gaccgtgtga 2341 tgtttgattt gggcttcatt tcgtgtgtag gagcacggtt agactcactg ttaaggaagc 2401 tggatgcact tctctaaaag gctgcacttt ccgtgagcac ttttcgtggt acaatccaca 2461 tgacccactt tctcccctgg gggacgttgg ttcagaggtt ggtagcactt ggggagagta 2521 tcttaacaca gtttcttgac agcagctctg gaacttagta tttctgcccc gagttttgcc 2581 acactgagac tttgagtagc tcctggtgga ctcaaccctg ttcaactcag agacgggcct 2641 cctctcactg atgcaaagct ttaaggcttc tctgactgtt ctgaaactct tcgtattctt 2701 gtcaagtcta aagagactga agaaaagatt taaatactaa taaaaatcag tagataattt 2761 ctgtaggttc tgctggagga atacaaactg tttggtgttt taaatttaag tgtagaaatt 2821 gtagaatgtg gaattagcac agatccttcc tggctttctg tttcacttga tcatttagcc 2881 cagaccaccc aggatgtttt ccaaaatgtt ccacaggcgt gtcccgctgg atccatttgt 2941 ccttgtcact tggagaaagg ccagtccctg tgacggggca gccctctctg tccctcggtc 3001 agctcgtgtg aatcctggga cctcttccgg tcggctctgc ccgctgttct ggggtcgact 3061 gccacgactt ttgattcaag aagcttcctc caggcgggag cggctatttt tcctaaatga 3121 gaattgttac attgcaaatt gttgaataaa atattttgcg ctccttcaaa aaaaaaaaaa 3181 aaaaaaaaaa aaaaaaaaaa //