LOCUS BC001398 1570 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens solute carrier family 25, member 39, mRNA (cDNA clone
MGC:1163 IMAGE:3051436), complete cds.
ACCESSION BC001398
VERSION BC001398.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1570)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1570)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001398.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706305.
FEATURES Location/Qualifiers
source 1..1570
/db_xref="H-InvDB:HIT000030380"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1163 IMAGE:3051436"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1570
/gene="SLC25A39"
/gene_synonym="CGI-69"
/gene_synonym="FLJ22407"
/db_xref="GeneID:51629"
/db_xref="HGNC:HGNC:24279"
CDS 122..1177
/gene="SLC25A39"
/gene_synonym="CGI-69"
/gene_synonym="FLJ22407"
/codon_start=1
/product="SLC25A39 protein"
/protein_id="AAH01398.1"
/db_xref="GeneID:51629"
/db_xref="HGNC:HGNC:24279"
/translation="MADQDPAGISPLQQMVASGTGAVVTSLFMTPLDVVKVRLQSQRP
SMASELMPSSRLWSLSYTKWKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDA
FVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFLCGRALTSDLYAPMVAG
ALARLGTVTVISPLELMRTKLQAQHVSYRELGACVRTAVAQGGWRSLWLGWGPTALRD
VPFSALYWFNYELVKSWLNGFRPKDQTSVGMSFVAGGISGTVAAVLTLPFDVVKTQRQ
VALGAMEAVRVNPLHVDSTWLLLRRIRAESGTKGLFAGFLPRIIKAAPSCAIMISTYE
FGKSFFQRLNQDRLLGG"
BASE COUNT 291 a 494 c 459 g 326 t
ORIGIN
1 gcctaggtgc gctgcgagcg cgcgcggacc gcgcacaggc ggcggagccg gtatgggccc
61 gcctgaccct gggcgccgcg ccgcacgagc accagcctag agccaggact gaagcttcaa
121 gatggctgac caggaccctg cgggcatcag ccccctccag caaatggtgg cctcaggcac
181 cggggctgtg gttacctctc tcttcatgac acccctggac gtggtgaagg ttcgcctgca
241 gtctcagcgg ccctccatgg ccagcgagct gatgccttcc tccagactgt ggagcctctc
301 ctataccaaa tggaagtgcc tcctgtattg caatggtgtc ctggagcctc tgtacctgtg
361 cccaaatggt gcccgctgtg ccacctggtt tcaagaccct acccgcttca ctggcaccat
421 ggatgccttc gtgaagatcg tgaggcacga gggcaccagg accctctgga gcggcctccc
481 cgccaccctg gtgatgactg tgccagctac cgccatctac ttcactgcct atgaccaact
541 gaaggccttc ctgtgtggtc gagccctgac ctctgacctc tacgcaccca tggtggctgg
601 cgcgctggcc cgcctgggca ccgtgactgt gatcagcccc ctggagctta tgcggacaaa
661 gctgcaggct cagcatgtgt cgtaccggga gctgggtgcc tgtgttcgaa ctgcagtggc
721 tcagggtggc tggcgctcac tgtggctggg ctggggcccc actgcccttc gagatgtgcc
781 cttctcagcc ctgtactggt tcaactatga gctggtgaag agctggctca atgggttcag
841 gccgaaggac cagacttctg tgggcatgag ctttgtggct ggtggcatct cagggacggt
901 ggctgcagtg ctgactctac cctttgacgt ggtaaagacc caacgccagg tcgctctggg
961 agcgatggag gctgtgagag tgaaccccct gcatgtggac tccacctggc tgctgctgcg
1021 gaggatccgg gccgagtcgg gcaccaaggg actctttgca ggcttccttc ctcggatcat
1081 caaggctgcc ccctcctgtg ccatcatgat cagcacctat gagttcggca aaagcttctt
1141 ccagaggctg aaccaggacc ggcttctggg cggctgaaag gggcaaggag gcaaggaccc
1201 cgtctctccc acggatgggg agagggcagg aggagaccca gccaagtgcc ttttcctcag
1261 cactgaggga gggggcttgt ttcccttccc tcccggcgac aagctccagg gcagggctgt
1321 ccctctgggc ggcccagcac ttcctcagac acaacttctt cctgctgctc cagtcgtggg
1381 gatcatcact tacccacccc ccaagttcaa gaccaaatct tccagctgcc cccttcgtgt
1441 ttccctgtgt ttgctgtagc tgggcatgtc tccaggaacc aagaagccct cagcctggtg
1501 tagtctccct gacccttgtt aattccttaa gtctaaagat gatgaacttc aaaaaaaaaa
1561 aaaaaaaaaa
//