LOCUS BC001391 1769 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens actin-like 6A, mRNA (cDNA clone MGC:1885
IMAGE:3050818), complete cds.
ACCESSION BC001391
VERSION BC001391.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001391.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089996.
FEATURES Location/Qualifiers
source 1..1769
/db_xref="H-InvDB:HIT000030374"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1885 IMAGE:3050818"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1769
/gene="ACTL6A"
/gene_synonym="ACTL6"
/gene_synonym="BAF53A"
/gene_synonym="MGC5382"
/db_xref="GeneID:86"
/db_xref="HGNC:HGNC:24124"
/db_xref="MIM:604958"
CDS 55..1344
/gene="ACTL6A"
/gene_synonym="ACTL6"
/gene_synonym="BAF53A"
/gene_synonym="MGC5382"
/codon_start=1
/product="actin-like 6A"
/protein_id="AAH01391.1"
/db_xref="GeneID:86"
/db_xref="HGNC:HGNC:24124"
/db_xref="MIM:604958"
/translation="MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMV
VERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAI
LDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAF
ANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELV
PPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDE
QVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVG
MCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFS
SWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP"
BASE COUNT 535 a 326 c 385 g 523 t
ORIGIN
1 ctgcagtcac ttcgccagtt agcccttagg gtaggagtcg cgccggcagc agccatgagc
61 ggcggcgtgt acgggggaga tgaagttgga gcccttgttt ttgacattgg atcctatact
121 gtgagagctg gttatgctgg tgaggactgc cccaaggtgg attttcctac agctattggt
181 atggtggtag aaagagatga cggaagcaca ttaatggaaa tagatggcga taaaggcaaa
241 caaggcggtc ccacctacta catagatact aatgctctgc gtgttccgag ggagaatatg
301 gaggccattt cacctctaaa aaatgggatg gttgaagact gggatagttt ccaagctatt
361 ttggatcata cctacaaaat gcatgtcaaa tcagaagcca gtctccatcc tgttctcatg
421 tcagaggcac cgtggaatac tagagcaaag agagagaaac tgacagagtt aatgtttgaa
481 cactacaaca tccctgcctt cttcctttgc aaaactgcag ttttgacagc atttgctaat
541 ggtcgttcta ctgggctgat tttggacagt ggagccactc ataccactgc aattccagtc
601 cacgatggct atgtccttca acaaggcatt gtgaaatccc ctcttgctgg agactttatt
661 actatgcagt gcagagaact cttccaagaa atgaatattg aattggttcc tccatatatg
721 attgcatcaa aagaagctgt tcgtgaagga tctccagcaa actggaaaag aaaagagaag
781 ttgcctcagg ttacgaggtc ttggcacaat tatatgtgta attgtgttat ccaggatttt
841 caagcttcgg tacttcaagt gtcagattca acttatgatg aacaagtggc tgcacagatg
901 ccaactgttc attatgaatt ccccaatggc tacaattgtg attttggtgc agagcggcta
961 aagattccag aaggattatt tgacccttcc aatgtaaagg ggttatcagg aaacacaatg
1021 ttaggagtca gtcatgttgt caccacaagt gttgggatgt gtgatattga tatcagacca
1081 ggtctctatg gcagtgtaat agtggcagga ggaaacacac taatacagag ttttactgac
1141 aggttgaata gagagctgtc tcagaaaact cctccaagta tgcggttgaa attgattgca
1201 aataatacaa cagtggaacg gaggtttagc tcatggattg gcggctccat tctagcctct
1261 ttgggtacct ttcaacagat gtggatttcc aagcaagaat atgaagaagg agggaagcag
1321 tgtgtagaaa gaaaatgccc ttgagaaaga gttcccaagc ttctaccttc cttttgtcac
1381 cttacgtttc atagctttag tatactcagg aaaagaatga ccatcttttg tagaatgttt
1441 atacattttt gcatatttca atttccactt aaatttttta aagctttaac tggctctata
1501 aattaagttt gtgctttcct tgaaatgcac ttattcttat tacaagcatt ttataatttt
1561 gtataaatgt ctattttctc taaatatttt gctttcagta aaatgctttc caactctgtt
1621 tagtgtatta attaccagtg gattggtaga actgcttttt attgactagt aaaagttact
1681 gcctatgctt tttaccttag gcttacagaa ttaaataaaa attagccatt ccagaaatat
1741 aaaaaaaaaa caaaaaaaaa aaaaaaaaa
//