LOCUS BC001381 1704 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens small nuclear ribonucleoprotein 25kDa (U11/U12), mRNA (cDNA clone MGC:668 IMAGE:3051476), complete cds. ACCESSION BC001381 VERSION BC001381.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1704) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1704) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: i Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52851417. FEATURES Location/Qualifiers source 1..1704 /db_xref="H-InvDB:HIT000030365" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:668 IMAGE:3051476" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1704 /gene="SNRNP25" /db_xref="GeneID:79622" /db_xref="HGNC:HGNC:14161" CDS 984..1382 /gene="SNRNP25" /codon_start=1 /product="small nuclear ribonucleoprotein 25kDa (U11/U12)" /protein_id="AAH01381.1" /db_xref="GeneID:79622" /db_xref="HGNC:HGNC:14161" /translation="MDVFQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVR VCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAG EKLTEDRKKLRDYGIRNRDEVSFIKKLRQK" BASE COUNT 381 a 485 c 556 g 282 t ORIGIN 1 ggcacgaggg agagatcgtc caggaggcgg tgttgatgcg gcaaagggca acaggaaggg 61 cattaggact tgaaatcgga gacgcacgca ggggagggag tcagtgtcgg aacctggtag 121 gccctgggag aactccggct tttcgtctgc gtgagctgga gaagagccga aggtttctgc 181 gcacagcacg gacctgcgtg cctcagcttt aaggaaatca ccgtggccgc cgctgtgaac 241 gcagagaagg gcgcgagcgt gggagcagga acccaaggcg gtgggaaacg gtggggcttt 301 ctgagtgtat tggaaagtag agcccacaga tctgctgcag accagaaagg ggcgcgagaa 361 agagcggaca gaggcagacg ccggggctgg cggcgatgga gcagcagtcg gaggacgcgg 421 aaggcctgcg agagtcgccc gcggcccagc gccggccttc gggtcccacc ttgcgggtga 481 tgttgtgcac gtaggggcac gtgttgcagg cgaagcggtg gcagcgttgt ccctcctcca 541 cgatcagccc gttcccgcag ccggggcaga acagcagcat ggtctcgaac tccgcaggct 601 ccaactcccg gcagctccca ctgccgctca gcgccgatgc gccgcccgcc tcgagctcac 661 attggtcctg gcagccttcc cgccacacca accaaccaat agacagggcg attctgcgct 721 cccggccctg ctgcaggctg tctcgcactt gtcattggtc actgcagccg ccccaccccc 781 cccggcgcgc cagtggctgg gcggcctcgc tggggcgggc cgcagttcct gcgcgtgcgc 841 gcttggcctc cctagtgcgg gctggcagtg cgggcagagc ccggctgaga ggggcggccc 901 tggaggagac ggaggccgcg ggtgggcccg aggcgcaaga ggaagatgag gacgaagaag 961 aggcgctgcc gcactccgag gccatggacg tgttccagga gggtctggct atggtggtgc 1021 aggacccgct gctctgcgat ctgccgatcc aggttactct ggaagaagtc aactcccaaa 1081 tagccctaga atacggccag gcaatgacgg tccgagtgtg caagatggat ggagaagtaa 1141 tgcccgtggt tgtagtgcag agtgccacag tcctggacct gaagaaggcc atccagagat 1201 acgtgcagct caagcaggag cgtgaagggg gcattcagca catcagctgg tcctacgtgt 1261 ggaggacgta ccatctgacc tctgcaggag agaaactcac ggaagacaga aagaagctcc 1321 gagactacgg catccggaat cgagacgagg tttccttcat caaaaagctg aggcaaaagt 1381 gagcctccag acaggacaac cctcttcatc actggtggct gagctttttc ccagcaggaa 1441 tgggtcctcg aatcatcgtg cctctttcac agaaaggacg ttgtggtggc ctcaccccag 1501 gcatgcccaa cagtaactgt cagcataaac ctgggggccc tcaggactag gacagggtga 1561 gccagtgctc cctcctttca tgtacttggc ctgagactga cctctcccta ggtccaaatg 1621 ccctagtcac atggcagacc cacggcctgg cccactgtat aaaataaacc tgtttgcttc 1681 ttaaaaaaaa aaaaaaaaaa aaaa //