LOCUS BC001357 2205 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens LAG1 homolog, ceramide synthase 2, mRNA (cDNA clone MGC:987 IMAGE:3051086), complete cds. ACCESSION BC001357 VERSION BC001357.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2205) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2205) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001357.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: a Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32455257. FEATURES Location/Qualifiers source 1..2205 /db_xref="H-InvDB:HIT000030343" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:987 IMAGE:3051086" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2205 /gene="LASS2" /gene_synonym="CerS2" /gene_synonym="L3" /gene_synonym="SP260" /gene_synonym="TMSG1" /db_xref="GeneID:29956" /db_xref="HGNC:HGNC:14076" /db_xref="MIM:606920" CDS 82..1224 /gene="LASS2" /gene_synonym="CerS2" /gene_synonym="L3" /gene_synonym="SP260" /gene_synonym="TMSG1" /codon_start=1 /product="LAG1 homolog, ceramide synthase 2" /protein_id="AAH01357.2" /db_xref="GeneID:29956" /db_xref="HGNC:HGNC:14076" /db_xref="MIM:606920" /translation="MLQTLYDYFWWERLWLPVNLTWADLEDRDGRVYAKASDLYITLP LALLFLIVRYFFELYVATPLAALLNIKEKTRLRAPPNATLEHFYLTSGKQPKQVEVEL LSRQSGLSGRQVERWFRRRRNQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWF YDMKKVWEGYPIQSTIPSQYWYYMIELSFYWSLLFSIASDVKRKDFKEQIIHHVATII LISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWKNTCNNIFIVFAIVFIITR LVILPFWILHCTLVYPLELYPAFFGYYFFNSMMGVLQLLHIFWAYLILRMAHKFITGK LVEDERSDREETESSEGEEAAAGGGAKSRPLANGHPILNNNHRKND" BASE COUNT 536 a 586 c 503 g 580 t ORIGIN 1 gcctcggggc ctcggagcaa ccacccgagc agacggagta cacggagcag cggccccggc 61 cccgccaacg ctgccgccgg gatgctccag accttgtatg attacttctg gtgggaacgt 121 ctgtggctgc ctgtgaactt gacctgggcc gatctagaag accgagatgg acgtgtctac 181 gccaaagcct cagatctcta tatcacgctg cccctggcct tgctcttcct catcgttcga 241 tacttctttg agctgtacgt ggctacacca ctggctgccc tcttgaacat aaaggagaaa 301 actcggctgc gggcacctcc caacgccacc ttggaacatt tctacctgac cagtggcaag 361 cagcccaagc aggtggaagt agagcttttg tcccggcaga gcgggctctc tggccgccag 421 gtagagcgtt ggttccgtcg ccgccgcaac caggaccggc ccagtctcct caagaagttc 481 cgagaagcca gctggagatt cacattttac ctgattgcct tcattgccgg catggccgtc 541 attgtggata aaccctggtt ctatgacatg aagaaagttt gggagggata tcccatacag 601 agcactatcc cttcccagta ttggtactac atgattgaac tttccttcta ctggtccctg 661 ctcttcagca ttgcctctga tgtcaagcga aaggatttca aggaacagat catccaccat 721 gtggccacca tcattctcat cagcttttcc tggtttgcca attacatccg agctgggact 781 ctaatcatgg ctctgcatga ctcttccgat tacctgctgg agtcagccaa gatgtttaac 841 tacgcgggat ggaagaacac ctgcaacaac atcttcatcg tcttcgccat tgtttttatc 901 atcacccgac tggtcatcct gcccttctgg atcctgcatt gcaccctggt gtacccactg 961 gagctctatc ctgccttctt tggctattac ttcttcaatt ccatgatggg agttctacag 1021 ctgctgcata tcttctgggc ctacctcatt ttgcgcatgg cccacaagtt cataactgga 1081 aagctggtag aagatgaacg cagtgaccgg gaagaaacag agagctcaga gggggaggag 1141 gctgcagctg ggggaggagc aaagagccgg cccctagcca atggccaccc catcctcaat 1201 aacaaccatc gtaagaatga ctgaaccatt attccagctg cctcccagat taatgcataa 1261 agccaaggaa ctaccctgct ccctgcgcta tagggtcact ttaagctctg gggaaaaagg 1321 agaaagtgag aggagagttc tctgcatcct ccctccttgc ttgtcaccca gttgccttta 1381 aaccaaattc taaccagcct atccccaggt agggggacgt tggttatatt ctgttagagg 1441 gggacggtcg tattttcctc cctacccgcc aagtcatcct ttctactgct tttgaggccc 1501 tccctcagct ctctgtgggt aggggttaca attcacattc cttattctga gaatttggcc 1561 ccagctgttt gcctttgact ccctgacctc cagagccagg gttgtgcctt attgtcccat 1621 ctgtgggcct cattctgcca aagctggacc aaggctaacc tttctaagct ccctaacttg 1681 ggccagaaac caaagctgag cttttaactt tctccctcta tgacacaaat gaattgaggg 1741 taggaggagg gtgcacataa cccttaccct acctctgcca aaaagtgggg gctgtactgg 1801 ggactgctcg gatgatcttt cttagtgcta cttctttcag ctgtccctgt agcgacaggt 1861 ctaagatctg actgcctcct ttctctggcc tcttccccct tccctcttct cttcagctag 1921 gctagctggt ttggagtaga atggcaacta attctaattt ttatttatta aatatttggg 1981 gttttggttt taaagccaga attacggcta gcacctagca tttcagcaga gggaccattt 2041 tagaccaaaa tgtactgtta atgggttttt tttttaaaat taaaagatta aataaaaaat 2101 attaaataaa acatggcaat aagtgtcaga ctattaggaa ttgagaaggg ggatcaacta 2161 aataaacgaa gagagtcttt cttaaaaaaa aaaaaaaaaa aaaaa //