LOCUS BC001356 1181 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interferon-induced protein 35, mRNA (cDNA clone
MGC:2935 IMAGE:3050452), complete cds.
ACCESSION BC001356
VERSION BC001356.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001356.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147320.
FEATURES Location/Qualifiers
source 1..1181
/db_xref="H-InvDB:HIT000030342"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2935 IMAGE:3050452"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1181
/gene="IFI35"
/gene_synonym="IFP35"
/db_xref="GeneID:3430"
/db_xref="HGNC:HGNC:5399"
/db_xref="MIM:600735"
CDS 141..1007
/gene="IFI35"
/gene_synonym="IFP35"
/codon_start=1
/product="interferon-induced protein 35"
/protein_id="AAH01356.1"
/db_xref="GeneID:3430"
/db_xref="HGNC:HGNC:5399"
/db_xref="MIM:600735"
/translation="MSAPLDAALHALQEEQARLKMRLWDLQQLRKELGDSPKDKVPFS
VPKIPLVFRGHTQQDPEVPKSLVSNLRIHCPLLAGSALITFDDPKVAEQVLQQKEHTI
NMEECRLRVQVQPLELPMVTTIQVMVSSQLSGRRVLVTGFPASLRLSEEELLDKLEIF
FGKTRNGGGDVDVRELLPGSVMLGFARDGVAQRLCQIGQFTVPLGGQQVPLRVSPYVN
GEIQKAEIRSQPVPRSVLVLNIPDILDGPELHDVLEIHFQKPTRGGGEVEALTVVPQG
QQGLAVFTSESG"
BASE COUNT 263 a 332 c 351 g 235 t
ORIGIN
1 ctgaggtgta tttcgggtct tgctggggct gagagagacc acagcccttt ggggggtaca
61 aacaagagtt cagttgctgt gaattctgcc actgtgccca gctctgaagc ctcagctctt
121 gccaaacaga cccgagaccc atgtcagccc cactggatgc cgccctccac gcccttcagg
181 aggagcaggc cagactcaag atgaggctgt gggacctgca gcagctgaga aaggagctcg
241 gggactcccc caaagacaag gtcccatttt cagtgcccaa gatccccctg gtattccgag
301 gacacaccca gcaggacccg gaagtgccta agtctttagt ttccaatttg cggatccact
361 gccctctgct tgcgggctct gctctgatca cctttgatga ccccaaagtg gctgagcagg
421 tgctgcaaca aaaggagcac acgatcaaca tggaggagtg ccggctgcgg gtgcaggtcc
481 agcccttgga gctgcccatg gtcaccacca tccaggtgat ggtgtccagc cagttgagtg
541 gccggagggt gttggtcact ggatttcctg ccagcctcag gctgagtgag gaggagctgc
601 tggacaagct agagatcttc tttggcaaga ctaggaacgg aggtggcgat gtggacgttc
661 gggagctact gccagggagt gtcatgctgg ggtttgctag ggatggagtg gctcagcgtc
721 tgtgccaaat cggccagttc acagtgccac tgggtgggca gcaagtccct ctgagagtct
781 ctccgtatgt gaatggggag atccagaagg ctgagatcag gtcgcagcca gttccccgct
841 cggtactggt gctcaacatt cctgatatct tggatggccc ggagctgcat gacgtcctgg
901 agatccactt ccagaagccc acccgcgggg gcggggaggt agaggccctg acagtcgtac
961 cccaaggaca gcagggccta gcagtcttca cctctgagtc aggctagggg cctccccttc
1021 tcatcctccc cacccccccg ccaaggttct cacactggcc tgggcttggg tgcccatata
1081 ggaggtctgt atgttcacca acagtgcgga ggggtcacac attgcaaaac actgcccaga
1141 acagtaaaaa gagcctgcat gccaaaaaaa aaaaaaaaaa a
//