LOCUS BC001337 1851 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polymerase (RNA) I polypeptide E, 53kDa, mRNA (cDNA
clone MGC:5609 IMAGE:3461710), complete cds.
ACCESSION BC001337
VERSION BC001337.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1851)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1851)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: j Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11968046.
FEATURES Location/Qualifiers
source 1..1851
/db_xref="H-InvDB:HIT000030326"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5609 IMAGE:3461710"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1851
/gene="POLR1E"
/gene_synonym="FLJ13390"
/gene_synonym="FLJ13970"
/gene_synonym="PAF53"
/gene_synonym="RP11-405L18.3"
/db_xref="GeneID:64425"
/db_xref="HGNC:HGNC:17631"
CDS 81..1340
/gene="POLR1E"
/gene_synonym="FLJ13390"
/gene_synonym="FLJ13970"
/gene_synonym="PAF53"
/gene_synonym="RP11-405L18.3"
/codon_start=1
/product="polymerase (RNA) I polypeptide E, 53kDa"
/protein_id="AAH01337.1"
/db_xref="GeneID:64425"
/db_xref="HGNC:HGNC:17631"
/translation="MAAEVLPSARWQYCGAPDGSQRAVLVQFSNGKLQSPGNMRFTLY
ENKDSTNPRKRNQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVY
DAELFNMQPLFSDVSVESELALESQTKTYREKMDSCIEAFGTTKQKRALNTRRMNRVG
NESLNRAVAKAAETIIDTKGVTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVYKFED
LLSPAEYEALQSPSEAFRNVTSEEILKMIEENSHCTFVIEALKSLPSDVESRDRQARC
IWFLDTLIKFRAHRVVKRKSALGPGVPHIINTKLLKHFTCLTYNNGRLRNLISDSMKA
KITAYVIILALHIHDFQIDLTVLQRDLKLSEKRMMEIAKAMRLKISKRRVSVAAGSEE
DHKLGTLSLPLPPAQTSDRLAKRRKIT"
BASE COUNT 526 a 418 c 483 g 424 t
ORIGIN
1 gcctgggctc ccgcgtgttt aaaagtgcgc ttgtggctgc tgctgtctta actcctgtgc
61 ttggcggaca gacaggccag atggcggcgg aggtgttgcc gagtgcgagg tggcagtatt
121 gtggggcgcc cgacgggagc cagagagctg tactggtcca gttctccaac gggaagctac
181 agagtccagg caacatgcgc tttaccttgt atgagaacaa agattccacc aaccccagga
241 agaggaatca acggatcctg gcagctgaaa cagataggct ctcctatgtg ggaaacaatt
301 ttgggactgg agccctcaaa tgcaacactt tgtgcaggca ctttgtggga attttgaaca
361 agacctctgg ccaaatggaa gtatatgatg ctgaattgtt caacatgcag ccactatttt
421 cagatgtatc agttgagagt gaactggcgc tagagagtca gaccaaaact tacagagaaa
481 agatggattc ttgtattgaa gcctttggta ccaccaaaca gaagcgagct ctgaacacca
541 ggagaatgaa cagagttggc aatgaatctt tgaatcgtgc agtggctaaa gctgcagaga
601 ctatcattga tacgaagggt gtgactgctc tggtcagcga tgctatccac aatgacttgc
661 aagatgactc cctctacctt cctccctgct atgatgatgc agccaagcct gaagacgtgt
721 ataaatttga agatcttctt tcccctgcgg agtatgaagc tcttcagagc ccatctgaag
781 ctttcaggaa cgtcacgtca gaagaaatac tgaagatgat tgaggagaac agccattgca
841 cctttgtcat agaagcgttg aagtctttgc catcagatgt ggagagccga gaccgccagg
901 cccgatgcat atggtttctg gataccctca tcaaatttcg agctcatagg gtagttaagc
961 ggaaaagtgc tctgggacct ggagttcccc acatcatcaa caccaaactg ctgaagcact
1021 ttacttgctt gacctacaac aatggcagat tacggaactt aatttcggat tctatgaagg
1081 cgaagattac tgcatatgtg atcatacttg ccttgcacat acatgacttc caaattgacc
1141 tgacagtgtt acagagggac ttgaagctca gtgagaaaag gatgatggag atagccaaag
1201 ccatgaggct gaagatctcc aaaagaaggg tgtctgtggc cgccggcagt gaagaagatc
1261 acaaactggg caccctgtcc ctcccgctgc ctccagccca gacctcagac cgcctggcaa
1321 agcggaggaa gattacctag acgcatgctt tccagacagg gcgttttggc tgcatcacag
1381 ccactggctg gtcctattca tttccatttt tatgtatgtt ttgaaaagaa aaggtccggg
1441 gatggtggct cacacctgaa atcccagcac tttgggaggc cgaggcagga agatcattga
1501 gctcaggagt ttgaaaccag tctggacaac atagggagac cccatctcta ccggaggaaa
1561 aaaaaaagag tcaggcctgg tggtgtgcgc ctgtaatccc agctactcgg gaggctgagg
1621 caggacgatt acttgagctt gggaaatcaa ggttgcagtg agctatgatt gtgtggccac
1681 actccatcct gggtcacaga gtgagacctt gtctcaaaaa agtaacataa ggaaaaaaga
1741 agccttgctt tagcacaggt atgaagccag aagccagcat ctcaactgtg cttgtcttat
1801 gcagaaatat aaagcgatgg ccaggttgga cttcaaaaaa aaaaaaaaaa a
//