LOCUS BC001283 2148 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens nuclear factor I/B, mRNA (cDNA clone MGC:5146
IMAGE:3462726), complete cds.
ACCESSION BC001283
VERSION BC001283.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2148)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2148)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: b Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031940.
FEATURES Location/Qualifiers
source 1..2148
/db_xref="H-InvDB:HIT000030289"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5146 IMAGE:3462726"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2148
/gene="NFIB"
/gene_synonym="NFI-RED"
/gene_synonym="NFIB2"
/gene_synonym="NFIB3"
/db_xref="GeneID:4781"
/db_xref="HGNC:HGNC:7785"
/db_xref="MIM:600728"
CDS 159..1421
/gene="NFIB"
/gene_synonym="NFI-RED"
/gene_synonym="NFIB2"
/gene_synonym="NFIB3"
/codon_start=1
/product="nuclear factor I/B"
/protein_id="AAH01283.1"
/db_xref="GeneID:4781"
/db_xref="HGNC:HGNC:7785"
/db_xref="MIM:600728"
/translation="MMYSPICLTQDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKK
HEKRMSKDEERAVKDELLSEKPEIKQKWASRLLAKLRKDIRQEYREDFVLTVTGKKHP
CCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLMKSPHCTNP
ALCVQPHHITVSVKELDLFLAYYVQEQDSGQSGSPSHNDPAKNPPGYLEDSFVKSGVF
NVSELVRVSRTPITQGTGVNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPSSKRPKTIS
IDENMEPSPTGDFYPSPSSPAAGSRTWHERDQDMSSPTTMKKPEKPLFSSASPQDSSP
RLSTFPQHHHPGIPGVAHSVISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPH
LNPQDTLKNYVPSYDPSSPQTSQSWYLG"
BASE COUNT 668 a 510 c 432 g 538 t
ORIGIN
1 gactgggttt gttgtgaagt tgcggtgatc cagcgcagag ccccgtcctg attgatcgca
61 tcgcggggct cagatgactg taaaatgaat agatgaaatt cttgcttctc gaagattttc
121 ttgggcatct cccggaaagt gcgttttaag gcgaagtcat gatgtattct cccatctgtc
181 tcactcagga tgaatttcac ccattcatcg aggcacttct tccacatgtc cgtgcaattg
241 cctatacttg gttcaacctg caggctcgaa aacgcaagta ctttaaaaag catgagaagc
301 gaatgtcaaa ggatgaagaa agagcagtca aagatgagct tctcagtgaa aagcctgaaa
361 tcaaacagaa gtgggcatcc aggctccttg ccaaactgcg caaagatatt cgccaggagt
421 atcgagagga ctttgtgctc accgtgactg gcaagaagca cccgtgctgt gtcttatcca
481 atcccgacca gaagggtaag attaggagaa tcgactgcct gcgacaggca gacaaagtct
541 ggcgtctgga tctagtcatg gtgatcctgt tcaaaggcat ccccttggaa agtaccgatg
601 gagagcggct catgaaatcc ccacattgca caaacccagc actttgtgtc cagccacatc
661 atatcacagt atcagttaag gagcttgatt tgtttttggc atactacgtg caggagcaag
721 attctggaca atcaggaagt ccaagccaca atgatcctgc caagaatcct ccaggttacc
781 ttgaggatag ttttgtaaaa tctggagtct tcaatgtatc agaacttgta agagtatcca
841 gaacgcccat aacccaggga actggagtca acttcccaat tggagaaatc ccaagccaac
901 catactatca tgacatgaac tcgggggtca atcttcagag gtctctgtct tctccaccaa
961 gcagcaaaag acccaaaact atatccatag atgaaaatat ggaaccaagt cctacaggag
1021 acttttaccc ctctccaagt tcaccagctg ctggaagtcg aacatggcac gaaagagatc
1081 aagatatgtc ttctccgact actatgaaga agcctgaaaa gccattgttc agctctgcat
1141 ctccacagga ttcttcccca agactgagca ctttccccca gcaccaccat cccggaatac
1201 ctggagttgc acacagtgtc atctcaactc gaactccacc tccaccttca ccgttgccat
1261 ttccaacaca agctatcctt cctccagccc catcgagcta cttttctcat ccaacaatca
1321 gatatcctcc ccacctgaat cctcaggata ctctgaagaa ctatgtacct tcttatgacc
1381 catccagtcc acaaaccagc cagtcctggt acctgggcta gcttggttcc tttccaagtg
1441 tcaaatagga cacccatctt accggccaat gtccaaaatt acggtttgaa cataattgga
1501 gaacctttcc ttcaagcaga aacaagcaac tgagggaaaa agaaacacaa caatagttta
1561 agaaattttt tttttaaata aaaaaaaagg aaaagaggaa gactggacaa aacaacacaa
1621 aggcagaaag gaaagaaact gaagaaagaa gataatagac cagcaattgc agcacttaca
1681 atcactaatt cccttaaggt tgaaactgta atgacataaa aagggtcgat gatatttcac
1741 tgatggtaga tcgcagcccc tgcaacgtag cctttgttac atgaagtccg ctgggaaata
1801 gatgttctgt ctctatgaca atatatttta actgactttc tagatgcctt aatatttgca
1861 tgataagcta gttttattgg tttagtattc ttgttgttta cgcatggaat cactattcct
1921 ggttatctca ccaacgaagg ctaggaggcg gcgtcagagg tgctgggtga cagagccatg
1981 agccagccat tttataagca ctctgatttc taaaagttaa aaaaaatata tgaaatctct
2041 gtagccttta gttatcagta cagatttatt aaatttcggc ccttaaccca gccttttcca
2101 gtgtgtaacc cagtttgaaa tcttaaaaaa agaaaaaaaa aaaaaaaa
//