LOCUS BC001281 1704 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member
10b, mRNA (cDNA clone MGC:5144 IMAGE:3458466), complete cds.
ACCESSION BC001281
VERSION BC001281.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1704)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1704)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547115.
FEATURES Location/Qualifiers
source 1..1704
/db_xref="H-InvDB:HIT000030287"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5144 IMAGE:3458466"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1704
/gene="TNFRSF10B"
/gene_synonym="CD262"
/gene_synonym="DR5"
/gene_synonym="KILLER"
/gene_synonym="KILLER/DR5"
/gene_synonym="TRAIL-R2"
/gene_synonym="TRAILR2"
/gene_synonym="TRICK2"
/gene_synonym="TRICK2A"
/gene_synonym="TRICK2B"
/gene_synonym="TRICKB"
/gene_synonym="ZTNFR9"
/db_xref="GeneID:8795"
/db_xref="HGNC:HGNC:11905"
/db_xref="MIM:603612"
CDS 148..1470
/gene="TNFRSF10B"
/gene_synonym="CD262"
/gene_synonym="DR5"
/gene_synonym="KILLER"
/gene_synonym="KILLER/DR5"
/gene_synonym="TRAIL-R2"
/gene_synonym="TRAILR2"
/gene_synonym="TRICK2"
/gene_synonym="TRICK2A"
/gene_synonym="TRICK2B"
/gene_synonym="TRICKB"
/gene_synonym="ZTNFR9"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 10b"
/protein_id="AAH01281.1"
/db_xref="GeneID:8795"
/db_xref="HGNC:HGNC:11905"
/db_xref="MIM:603612"
/translation="MEQRGQNAPAASGARKRHGPGPREARGARPGLRVPKTLVLVVAA
VLLLVSAESALITQQDLAPQQRAAPQQKRSSPSEGLCPPGHHISEDGRDCISCKYGQD
YSTHWNDLLFCLRCTRCDSGEVELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGC
PRGMVKVGDCTPWSDIECVHKESGTKHSGEAPAVEETVTSSPGTPASPCSLSGIIIGV
TVAAVVLIVAVFVCKSLLWKKVLPYLKGICSGGGGDPERVDRSSQRPGAEDNVLNEIV
SILQPTQVPEQEMEVQEPAEPTGVNMLSPGESEHLLEPAEAERSQRRRLLVPANEGDP
TETLRQCFDDFADLVPFDSWEPLMRKLGLMDNEIKVAKAEAAGHRDTLYTMLIKWVNK
TGRDASVHTLLDALETLGERLAKQKIEDHLLSSGKFMYLEGNADSAMS"
BASE COUNT 438 a 448 c 472 g 346 t
ORIGIN
1 gccccaagtc agcctggaca cataaatcag cacgcggccg gagaaccccg caatctctgc
61 gcccacaaaa tacaccgacg atgcccgatc tactttaagg gctgaaaccc acgggcctga
121 gagactataa gagcgttccc taccgccatg gaacaacggg gacagaacgc cccggccgct
181 tcgggggccc ggaaaaggca cggcccagga cccagggagg cgcggggagc caggcctggg
241 ctccgggtcc ccaagaccct tgtgctcgtt gtcgccgcgg tcctgctgtt ggtctcagct
301 gagtctgctc tgatcaccca acaagaccta gctccccagc agagagcggc cccacaacaa
361 aagaggtcca gcccctcaga gggattgtgt ccacctggac accatatctc agaagacggt
421 agagattgca tctcctgcaa atatggacag gactatagca ctcactggaa tgacctcctt
481 ttctgcttgc gctgcaccag gtgtgattca ggtgaagtgg agctaagtcc ctgcaccacg
541 accagaaaca cagtgtgtca gtgcgaagaa ggcaccttcc gggaagaaga ttctcctgag
601 atgtgccgga agtgccgcac agggtgtccc agagggatgg tcaaggtcgg tgattgtaca
661 ccctggagtg acatcgaatg tgtccacaaa gaatcaggta caaagcacag tggggaagcc
721 ccagctgtgg aggagacggt gacctccagc ccagggactc ctgcctctcc ctgttctctc
781 tcaggcatca tcataggagt cacagttgca gccgtagtct tgattgtggc tgtgtttgtt
841 tgcaagtctt tactgtggaa gaaagtcctt ccttacctga aaggcatctg ctcaggtggt
901 ggtggggacc ctgagcgtgt ggacagaagc tcacaacgac ctggggctga ggacaatgtc
961 ctcaatgaga tcgtgagtat cttgcagccc acccaggtcc ctgagcagga aatggaagtc
1021 caggagccag cagagccaac aggtgtcaac atgttgtccc ccggggagtc agagcatctg
1081 ctggaaccgg cagaagctga aaggtctcag aggaggaggc tgctggttcc agcaaatgaa
1141 ggtgatccca ctgagactct gagacagtgc ttcgatgact ttgcagactt ggtgcccttt
1201 gactcctggg agccgctcat gaggaagttg ggcctcatgg acaatgagat aaaggtggct
1261 aaagctgagg cagcgggcca cagggacacc ttgtacacga tgctgataaa gtgggtcaac
1321 aaaaccgggc gagatgcctc tgtccacacc ctgctggatg ccttggagac gctgggagag
1381 agacttgcca agcagaagat tgaggaccac ttgttgagct ctggaaagtt catgtatcta
1441 gaaggtaatg cagactctgc catgtcctaa gtgtgattct cttcaggaag tcagaccttc
1501 cctggtttac cttttttctg gaaaaagccc aactggactc cagtcagtag gaaagtgcca
1561 caattgtcac atgaccggta ctggaagaaa ctctcccatc caacatcacc cagtggatgg
1621 aacatcctgt aacttttcac tgcacttggc attattttta taagctgaat gtgataataa
1681 ggacactaaa aaaaaaaaaa aaaa
//