LOCUS BC001264 1368 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens WD repeat domain 68, mRNA (cDNA clone MGC:5032
IMAGE:3458293), complete cds.
ACCESSION BC001264
VERSION BC001264.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1368)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1368)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51242961
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1368
/db_xref="H-InvDB:HIT000030271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5032 IMAGE:3458293"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1368
/gene="WDR68"
/gene_synonym="AN11"
/gene_synonym="HAN11"
/db_xref="GeneID:10238"
/db_xref="HGNC:HGNC:30915"
/db_xref="MIM:605973"
CDS 197..1225
/gene="WDR68"
/gene_synonym="AN11"
/gene_synonym="HAN11"
/codon_start=1
/product="WDR68 protein"
/protein_id="AAH01264.1"
/db_xref="GeneID:10238"
/db_xref="HGNC:HGNC:30915"
/db_xref="MIM:605973"
/translation="MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYN
NKVQLVGLDEESSEFICRNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGE
TETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVN
LVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYED
PQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAP
HSSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYN
NCLEILRV"
BASE COUNT 311 a 392 c 355 g 310 t
ORIGIN
1 ccgttcccaa gctggtttga aactaggggt cgggctcggc cgtcgtcgtt gtttgtcgcc
61 gcatccccgc ttccgggtta ggccgttcct gcccgccccc tcctctcctc ccttcggacc
121 catagatctc aggctcggct ccccgcccgc cgcagcccac tgttgacccg gcccgtactg
181 cggccccgtg gccaccatgt ccctgcacgg caaacggaag gagatctaca agtatgaagc
241 gccctggaca gtctacgcga tgaactggag tgtgcggccc gataagcgct ttcgcttggc
301 gctgggcagc ttcgtggagg agtacaacaa caaggttcag cttgttggtt tagatgagga
361 gagttcagag tttatttgca gaaacacctt tgaccaccca taccccacca caaagctcat
421 gtggatccct gacacaaaag gcgtctatcc agacctactg gcaacaagcg gtgactatct
481 ccgtgtgtgg agggttggtg aaacagagac caggctggag tgtttgctaa acaataataa
541 gaactctgat ttctgtgctc ccctgacctc ctttgactgg aatgaggtgg atccttatct
601 tttaggtacc tcaagcattg atacgacatg caccatctgg gggctggaga cagggcaggt
661 gttagggcga gtgaatctcg tgtctggcca cgtgaagacc cagctgatcg cccatgacaa
721 agaggtctat gatattgcat ttagccgggc cgggggtggc agggacatgt ttgcctctgt
781 gggtgctgat ggctcggtgc ggatgtttga cctccgccat ctagaacaca gcaccatcat
841 ttacgaagac ccacagcatc acccactgct tcgcctctgc tggaacaagc aggaccctaa
901 ctacctggcc accatggcca tggatggaat ggaggtggtg attctagatg tccgggttcc
961 ctgcacacct gtcgccaggt taaacaacca tcgagcatgt gtcaatggca ttgcttgggc
1021 cccacattca tcctgccaca tctgcactgc agcggatgac caccaggctc tcatctggga
1081 catccagcaa atgccccgag ccattgagga ccctatcctg gcctacacag ctgaaggaga
1141 gatcaacaat gtgcagtggg catcaactca gcccgactgg atcgccatct gctacaacaa
1201 ctgcctggag atactcagag tgtagtgttg gtggcgctgt gcccacgagg caggggcttt
1261 tgtatttcct gcctctgccc cacccccaaa cctcctgtat aagaagtacc gtattttctg
1321 cccatcatac tttgtaataa aacttgaaca tgtaaaaaaa aaaaaaaa
//