LOCUS BC001259 1587 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens adaptor-related protein complex 4, sigma 1 subunit,
mRNA (cDNA clone MGC:5011 IMAGE:3454117), complete cds.
ACCESSION BC001259
VERSION BC001259.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1587)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1587)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361393.
FEATURES Location/Qualifiers
source 1..1587
/db_xref="H-InvDB:HIT000030267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5011 IMAGE:3454117"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1587
/gene="AP4S1"
/gene_synonym="AP47B"
/gene_synonym="CLA20"
/gene_synonym="CLAPS4"
/db_xref="GeneID:11154"
/db_xref="HGNC:HGNC:575"
/db_xref="MIM:607243"
CDS 173..652
/gene="AP4S1"
/gene_synonym="AP47B"
/gene_synonym="CLA20"
/gene_synonym="CLAPS4"
/codon_start=1
/product="adaptor-related protein complex 4, sigma 1
subunit"
/protein_id="AAH01259.1"
/db_xref="GeneID:11154"
/db_xref="HGNC:HGNC:575"
/db_xref="MIM:607243"
/translation="MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSN
EQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELD
VSFFNTVFHSTWQMHSGPYQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPIY"
BASE COUNT 449 a 372 c 378 g 388 t
ORIGIN
1 cgcgtagcca gtgaaggttg gggagcaagc ttatgcggga aagagggagg gggactccag
61 gaaaagccgt tgagaggacc atcacaacct gagcagcaca ggttccagtt acagccatcc
121 cttgtcataa cttttgaact gtatttggaa aaatactggc caggaaagaa aaatgataaa
181 atttttcctc atggtgaata aacaagggca gactcgactt tctaagtact atgaacatgt
241 ggatattaat aagcgtacac ttctggaaac agaagtcata aagagctgtc tctctcgatc
301 caatgaacaa tgctctttca ttgaatataa ggattttaag ctgatatatc ggcagtatgc
361 agctctcttc attgtggttg gagttaatga cactgagaac gagatggcta tttatgaatt
421 cattcataac tttgtggaag ttttagatga gtatttcagc cgagtgagtg aattagatgt
481 atcctttttc aatactgttt tccacagtac ttggcaaatg cactctggtc cttatcagga
541 accaattgat gaacttccca aaatatgctc agccctggag ccccagcaga cttgcttttc
601 tccagacagt tcatcattca aaggagctgc ctccaccacc cccatctact gaatagccag
661 gggagggcac caatgaacag cacagtatgg gagacacacc aactactctt caaatcagtg
721 cgtacctgct ctacgcgtga aggtacagaa aacctccacg gccttttcag tatttggtgc
781 ctttaaagag gcctaaggac ttagtttatt tgggctagac tggaatgcag cagtactgcc
841 ttcaggcctg gacagccagg ggctcctcgg gccctgtgct ctagaaggcc cattctatgt
901 ctgcttcgcc agcacccttt ccccatcatg gggcagatgc ccaccagccc tcactatcta
961 ctgcttgacc atcctctgac ttcctgggcc cctagaattt ataaggtccc tagatatccc
1021 agaacctgcc accatggcct ctgcaagcct ctcctccacc ttcaccccaa gactaggggc
1081 aggaatgata agaaggctgg gtggtagctg ggatgtccca cctacgtgcc tggggagaga
1141 agcaagagca ggctggagtc tctactttgt attcttgtga ggcacaaata taggctagaa
1201 tccaggcccc acaaatatag gctagaatcc ggaatgtttt cttgatttaa agacatcttt
1261 agaccgggca cagtggctca cgccagtaat cccagcactt tggagggctg aagcaggagg
1321 attgcttgag gccgggagtt tgagaccagc ctgggcaaca tggggagacc cagtctctac
1381 aaaaaaattt aaaaagccag gcattggtgg tgtgtgccta tagtcccaac tactagggag
1441 gctgaggtgg gaggatcact tgagcctggg ggactgaggc tgcagtgagc catgattgtg
1501 ctactgcact ccaatctggc aacagagcga gaccttgtct ttaaaaataa aaataaaaac
1561 atctttacaa caaaaaaaaa aaaaaaa
//