LOCUS BC001253 1954 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens asparagine-linked glycosylation 6,
alpha-1,3-glucosyltransferase homolog (S. cerevisiae), mRNA (cDNA
clone MGC:4979 IMAGE:3452687), complete cds.
ACCESSION BC001253
VERSION BC001253.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38026891.
FEATURES Location/Qualifiers
source 1..1954
/db_xref="H-InvDB:HIT000030261"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4979 IMAGE:3452687"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1954
/gene="ALG6"
/db_xref="GeneID:29929"
/db_xref="HGNC:HGNC:23157"
/db_xref="MIM:604566"
CDS 238..1761
/gene="ALG6"
/codon_start=1
/product="asparagine-linked glycosylation 6,
alpha-1,3-glucosyltransferase homolog (S. cerevisiae)"
/protein_id="AAH01253.1"
/db_xref="GeneID:29929"
/db_xref="HGNC:HGNC:23157"
/db_xref="MIM:604566"
/translation="MEKWYLMTVVVLIGLTVRWTVSLNSYSGAGKPPMFGDYEAQRHW
QEITFNLPVKQWYFNSSDNNLQYWGLDYPPLTAYHSLLCAYVAKFINPDWIALHTSRG
YESQAHKLFMRTTVLIADLLIYIPAVVLYCCCLKEISTKKKIANALCILLYPGLILID
YGHFQYNSVSLGFALWGVLGISCDCDLLGSLAFCLAINYKQMELYHALPFFCFLLGKC
FKKGLKGKGFVLLVKLACIVVASFVLCWLPFFTEREQTLQVLRRLFPVDRGLFEDKVA
NIWCSFNVFLKIKDILPRHIQLIMSFCFTFLSLLPACIKLILQPSSKGFKFTLVSCAL
SFFLFSFQVHEKSILLVSLPVCLVLSEIPFMSTWFLLVSTFSMLPLLLKDELLMPSVV
TTMAFFIACVTSFSIFEKTSEEELQLKSFSISVRKYLPCFTFLSRIIQYLFLISVITM
VLLTLMTVTLDPPQKLPDLFSVLVCFVSCLNFLFFLVYFNIIIMWDSKSGRNQKKIS"
BASE COUNT 554 a 356 c 370 g 674 t
ORIGIN
1 cgcgaatccc agcggccggc gggcggcggg gatacttcta catagacata atcaagtttt
61 gactatttgg aaaccaagca tcattaaaat tctctcaaac tcctaattgc gaagaatcga
121 taacatttca agaagtgata acatttctct gaacaagaaa agaagtgatt gaccacgttt
181 taaaagtact ctggcactgg tgctgtgttt tcttcccctc cctaaatttg aagaactatg
241 gagaaatggt acttgatgac agtagtggtt ttaataggac taacagtacg atggacagtg
301 tctcttaatt cttattcagg tgctggtaaa ccgcctatgt ttggtgatta tgaagctcag
361 agacactggc aagaaataac ttttaattta ccggtcaaac aatggtattt taacagcagt
421 gataacaatt tacagtattg gggattggat tacccacctc ttacagctta tcatagtctc
481 ctatgtgcat atgtggcaaa gtttataaat ccagactgga ttgctctcca tacatcacgt
541 ggatatgaga gtcaggcaca taagctcttc atgcgtacaa cagttttaat tgctgatctg
601 ctgatttaca tacctgcagt ggttttgtac tgttgttgct taaaagaaat ctcaactaag
661 aaaaagattg ctaatgcatt atgcatcttg ctgtatccag gccttattct tatagactat
721 ggacattttc aatataattc tgtgagtctt ggctttgctt tgtggggtgt tcttggaata
781 tcttgtgact gcgacctcct agggtcactg gcattttgct tagctataaa ttataaacag
841 atggaacttt accacgcctt gccatttttt tgctttttac ttggcaagtg ttttaaaaaa
901 ggcctcaaag gaaaggggtt tgtgttgcta gttaagctag cttgtattgt tgtggcttcc
961 ttcgttctct gctggctgcc attctttaca gaaagggaac aaaccctgca ggttctaaga
1021 agactcttcc cggttgatcg tggattattt gaggataaag tagccaatat ttggtgcagc
1081 ttcaatgtct ttctgaagat taaggatatt ttgccacgtc acatccaatt aataatgagc
1141 ttttgtttta cgtttttgag cctgcttcct gcatgcataa aattaatact tcagccctct
1201 tccaaaggat tcaaatttac actggttagc tgtgcgctat cattcttttt attttctttc
1261 caagtacatg aaaaatccat tctcttggtg tcactaccag tctgcttagt tttaagtgaa
1321 attcctttta tgtctacttg gtttttactt gtgtcaacat ttagtatgct acctcttcta
1381 ttgaaggatg aactcctaat gccctctgtt gtgacaacaa tggcattttt tatagcttgt
1441 gtaacttcct tttcaatatt tgaaaagact tctgaagaag aactgcagtt gaaatccttt
1501 tccatttctg tgaggaaata tcttccatgt tttacatttc tttccagaat tatacaatat
1561 ttgtttctta tctcagtcat cactatggtg cttctgacgt tgatgactgt cacactggat
1621 cctcctcaga aactaccgga cttgttttct gtattggtgt gttttgtatc ttgcttgaac
1681 ttcctgttct tcttggtata ctttaacatt attattatgt gggattccaa aagtggaaga
1741 aatcagaaga aaatcagcta gctgtattcc taaacaaatt gtttcctaaa caaatgtgaa
1801 aatgtgaaca gtgctgaaag gttttgtgaa ctttttgcta tgtataaatg aaattaccat
1861 tttgagaacc atggaaccac aggaaaggaa atggtgaaaa gtcattgttg tctacacaaa
1921 ataaatgtat atggagacca aaaaaaaaaa aaaa
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