LOCUS BC001242 1573 bp mRNA linear HUM 20-DEC-2004
DEFINITION Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone
IMAGE:3451902), partial cds.
ACCESSION BC001242
VERSION BC001242.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1573)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1573)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 1, 2003 this sequence version replaced BC001242.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: c Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33354282.
FEATURES Location/Qualifiers
source 1..1573
/db_xref="H-InvDB:HIT000030250"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3451902"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1573
/gene="DET1"
/gene_synonym="FLJ10103"
/db_xref="GeneID:55070"
CDS <1..1088
/gene="DET1"
/gene_synonym="FLJ10103"
/codon_start=3
/product="DET1 protein"
/protein_id="AAH01242.2"
/db_xref="GeneID:55070"
/translation="DYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILS
VQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPFRDPF
INSLKHRLLVYLWRRAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSE
DVVTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEVQ
FPCSASSNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSL
FSYDDKWVSVMERPKTCGDHPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFH
PFEPFAISVQRTNAEYVVNFHMRHCCT"
BASE COUNT 394 a 376 c 352 g 451 t
ORIGIN
1 aagactattc cctccatatc attgaccttc acaccggccg cttatgtgat acacgcacgt
61 tcaagtgtga caaggtggtc ttgtcacaca accaagggct gtacttgtac aaaaacatcc
121 tggccatctt gtctgtgcaa caacagacca tccatgtctt ccaggtgact cctgaaggca
181 ctttcattga tgtgcggacc attggccgct tttgctatga ggatgacctg ctcactgtgt
241 cagctgtttt ccctgaggta cagcgggaca gtcagacagg catggccaat ccctttaggg
301 atcctttcat caattccctc aaacaccggt tgctggtata tttgtggcgc cgggcagaac
361 aggatggtag tgcaatggcc aagaggcgct tcttccagta ttttgaccaa ctgcggcagc
421 tgcgaatgtg gaaaatgcag cttctggatg aaaaccacct gtttatcaag tacactagtg
481 aggatgtagt aacactgcga gtcacagatc catcacaggc atctttcttt gtggtgtaca
541 atatggtgac gacagaggtg attgctgtgt ttgagaatac atcagatgag cttttggagc
601 tctttgagaa cttctgtgac ctttttcgta atgctaccct gcacagtgaa gttcagtttc
661 cctgctcagc ttctagcaac aattttgcaa ggcagatcca gcgccggttc aaagacacta
721 ttataaatgc caagtatgga gggcacacag aggcagtacg ccggctgctg ggtcagctcc
781 ccatcagtgc tcagtcttac agcggtagcc cctatctgga tttgtctctc ttcagttatg
841 atgacaagtg ggtatctgtc atggagcggc ccaagacttg tggagatcac ccaatcaggt
901 tctatgcccg ggactcgggc ctgctcaagt ttgagatcca ggcggggtta ttgggccgcc
961 ccatcaacca cacagtgcga cgccttgttg ccttcacctt tcaccctttt gagcctttcg
1021 ctatttctgt gcagaggact aatgctgagt atgttgtcaa cttccatatg cgacactgct
1081 gcacgtaggt gcctcaccag agccagatta tctggtcttc caagactttg ccactcactt
1141 atctcagtgg actccaaagc aaaagctccc gactactagc tctgttagtt ccagcctgct
1201 atacctcaga tgggagagag ccagagagag gagtgagggt ggctcaacct aatggaattt
1261 ttaaattgta tacaatactg ctactgattg ttataatatc ctcttgcgtt ttccctgtgg
1321 gaatgcccag cattaattaa gtccatttca tttttgcttt actttgcatt tgattgctgt
1381 gaagatgaaa gcattagact tttatcccct tcatgtcact tcttcggcat tatggtttgc
1441 atctgaaagc agttaaatct tgtttactga tgagaatgac atacatcctt tccatttagc
1501 tcataagcac ggctatcttt ttaagagaaa aataaagcca tggtattttc atacttaaaa
1561 aaaaaaaaaa aaa
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