LOCUS BC001239 1427 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens zinc finger, DHHC-type containing 4, mRNA (cDNA clone
MGC:4935 IMAGE:3459274), complete cds.
ACCESSION BC001239
VERSION BC001239.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1427)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1427)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: k Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361700.
FEATURES Location/Qualifiers
source 1..1427
/db_xref="H-InvDB:HIT000030247"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4935 IMAGE:3459274"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1427
/gene="ZDHHC4"
/gene_synonym="FLJ10479"
/gene_synonym="ZNF374"
/db_xref="GeneID:55146"
CDS 312..1346
/gene="ZDHHC4"
/gene_synonym="FLJ10479"
/gene_synonym="ZNF374"
/codon_start=1
/product="ZDHHC4 protein"
/protein_id="AAH01239.1"
/db_xref="GeneID:55146"
/translation="MDFLVLFLFYLASVLMGLVLICVCSKTHSLKGLARGGAQIFSCI
IPECLQRAVHGLLHYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLL
LPYLLLGVNLFFFTLTCGTNPGIITKANELLFLHVYEFDEVMFPKNVRCSTCDLRKPA
RSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAIVSTTFLVH
LVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLF
VLYLAATNQTTNEWYRGDWAWCQRCPLVAWPPSAEPQVHRNIHSHGLRSNLQEIFLPA
FPCHERKKQE"
BASE COUNT 307 a 384 c 348 g 388 t
ORIGIN
1 ggagcccagc ggctggcggg ccgccgtccc acccccacct cgccggagtc cggggcggcc
61 ccggtgtccc ctccgagcct gctgcactcc acgtccccct accagggctc cagcccccag
121 ggaaatctcc gaccaggccc gcccaggagc cagatccagg ctcctggaag aaccatgtcc
181 ggcagctact ggtcatgcca ggcacacact gctgcccaag aggagctgct gtttgaatta
241 tctgtgaatg ttgggaagag gaatgccaga gctgccggct gaaaattacc caaccaagag
301 aaatctgcag gatggacttt ctggtcctct tcttgttcta cctggcttcg gtgctgatgg
361 gtcttgttct tatctgcgtc tgctcgaaaa cccatagctt gaaaggcctg gccaggggag
421 gagcacagat attttcctgt ataattccag aatgtcttca gagagccgtg catggattgc
481 ttcattacct tttccatacg agaaaccaca ccttcattgt cctgcacctg gtcttgcaag
541 ggatggttta tactgagtac acctgggaag tatttggcta ctgtcaggag ctggagttgt
601 ccttgcatta ccttcttctg ccctatctgc tgctaggtgt aaacctgttt tttttcaccc
661 tgacttgtgg aaccaatcct ggcattataa caaaagcaaa tgaattatta tttcttcatg
721 tttatgaatt tgatgaagtg atgtttccaa agaacgtgag gtgctctact tgtgatttaa
781 ggaaaccagc tcgatccaag cactgcagtg tgtgtaactg gtgtgtgcac cgtttcgacc
841 atcactgtgt ttgggtgaac aactgcatcg gggcctggaa catcaggtac ttcctcatct
901 acgtcttgac cttgacggcc tcggctgcca ccgtcgccat tgtgagcacc acttttctgg
961 tccacttggt ggtgatgtca gatttatacc aggagactta catcgatgac cttggacacc
1021 tccatgttat ggacacggtc tttcttattc agtacctgtt cctgactttt ccacggattg
1081 tcttcatgct gggctttgtc gtggttctga gcttcctcct gggtggctac ctgttgtttg
1141 tcctgtatct ggcggccacc aaccagacta ctaacgagtg gtacagaggt gactgggcct
1201 ggtgccagcg ttgtcccctt gtggcctggc ctccgtcagc agagccccaa gtccaccgga
1261 acattcactc ccatgggctt cggagcaacc ttcaagagat ctttctacct gcctttccat
1321 gtcatgagag gaagaaacaa gaatgacaag tgtatgactg cctttgagct gtagttcccg
1381 tttatttaca catgtggatc ctcgttttcc aaaaaaaaaa aaaaaaa
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