LOCUS BC001196 3220 bp mRNA linear HUM 12-JUL-2001
DEFINITION Homo sapiens, Similar to heparan sulfate 6-O-sulfotransferase,
clone IMAGE:3355592, mRNA, partial cds.
ACCESSION BC001196
VERSION BC001196.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3220)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3220
/db_xref="H-InvDB:HIT000085971"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3355592"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS <1..519
/codon_start=1
/product="Similar to heparan sulfate 6-O-sulfotransferase"
/protein_id="AAH01196.1"
/translation="DCPYNLANNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLESAKK
NLRGMAFFGLTEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRRIEELN
DLDMQLYDYAKDLFQQRYQYKRQLERREQRLRSREERLLHRAKEALPREDADEPGRVP
TEDYMSHIIEKW"
BASE COUNT 701 a 947 c 950 g 622 t
ORIGIN
1 gactgcccgt acaacctggc caacaaccgc caggtgcgca tgctggccga cctgagcctg
61 gtgggctgct acaacctgtc cttcatcccc gagggcaagc gggcccagct gctgctcgag
121 agcgccaaga agaacctgcg gggcatggcc ttcttcggcc tgaccgagtt ccagcgcaag
181 acgcagtacc tgttcgagcg gacgttcaac ctcaagttca tccggccctt catgcagtac
241 aatagcacgc gggcgggcgg cgtggaggtg gatgaagaca ccatccggcg catcgaggag
301 ctcaacgacc tggacatgca gctgtacgac tacgccaagg acctcttcca gcagcgctac
361 cagtacaagc ggcagctgga gcgcagggag cagcgcctga ggagccgcga ggagcgtctg
421 ctgcaccggg ccaaggaggc actgccgcgg gaggatgccg acgagccggg ccgcgtgccc
481 accgaggact acatgagcca catcattgag aagtggtagt ggcggtggtg gccacgggga
541 ggcctcttgg ggggtgtggg ggataaaaca ggacagacga caggtccacc caagactgtc
601 aagggatgag catcccaaac ctgctccaca gaggtagctg cgtcctgaaa aaaaacagag
661 cagggatgta gtggggctgg gcagggatgg gggcttgaga aatcaacagg tgcagcccag
721 tgggtcagag gaaagcgtgc tcgaaggatg ccatggtcag ggcagggcct ccagagcagg
781 tgttgtgcct ggagctgctc tcctggcctc cttggattta tcgcaaaaac tgaaggtttg
841 cgcaagagac gaggacagcg gaaagtggac ctgccaggcc gggagtgtgt ccctcaccaa
901 ctatgcacac agcactcgct cttagctcct ctgtccgggc tactaggagt gagaccagct
961 tctggcaact gccccagctc caggccatcc catagcccct cctcttctgg ctgcccccaa
1021 tgccccgagg cctggggagc ccccagctca cccatctgta gctccctcaa agtcagggcc
1081 caccccatct gaggcagaga agactcgagt ccagccccca ggaagcctgc tcccctctct
1141 ggcccatggt cctgcttcat gctttgggtc aggaggccaa agctgatgtt caggccccac
1201 ccactcccta cagtcctcag accaaggagg ggtttgggta gtaggcccga gctgcattgc
1261 cggccttcct cgggccaact ggcagcccag gagtggggag gctttggcca gggatgctgc
1321 cacttgtgcg tgagtccgcg gctggccctt ggaggtgacc atccaggcag gcctggctca
1381 gactggaagg gctggggacc gagggctccc ctgcctctgt tctcctttct gacccactgg
1441 gatttgctag caggctgccc cagccccatc accgaaacac atactcaaga gctcaaatac
1501 cactgctccc accagcgtac ggattaagtt catcaggctt ccatcggctg gagcatggga
1561 ccatagcccc tgcccaggag ccgtaccctc ggaccacagt ggctctgtat ggccaggaac
1621 tgggactcga gctttcagat tctcaactag ccttggcaaa acagctgtag gtggcctccc
1681 tgacaacaga cactcagccc tccccaccct ggctctcctt gcatttcccc atgctcccca
1741 ccccctggca aaaggctggc catgctctgt tcccagcagc cgcgcaggtt tccccactgg
1801 ctgcaatggc cctaccaaaa gccatgttgc atatccgttg taagcacgtg ccctgtgccc
1861 tgtccccatt ccttatgccc taggaggcca agctggtgtc tctaggaggg cccacacagg
1921 caccctggat cccccagaga gtagattggt gtgctcaggc cgcaggctga ctcagaggta
1981 gggcagtggg ctctgcaggc cacctggctg gggttggtgg gggtcctctc tcctgcccca
2041 gcttccactc agccaccaca gttgccacac catggggtgg agacgtgggt caccacgggc
2101 ttgggagcaa gcgccttctg cagcacagga agccgaagct ggggtcaggt gaggtcgcta
2161 cccctggagg tctggcataa gggccccacc ctcaggtctc ctacactggc cccattttac
2221 tttggggtcc aaggacagga tggtcaacag ggcagggtgg acagcgtgcc agcgccgcgc
2281 agggccacct ccctgggtgg atgcatcaca ctaaggaagt gagtgccaag gggatttagt
2341 ggtgtggttc tttcaaaggg aggtcagggt caatgggaat ctgctcggac actcaacatg
2401 ggggtgggtg cactccttgg aggaggagga acacgttcag gggattgtga ggtcttgcac
2461 aagccacgtg gggcaccttg gcttcccggc aggaggtgga cacccagcca gaggcctggc
2521 tcaaggtgac ctcaccttca ccatgggctt cctgggtgcg cgggcctgag cgcaggttgt
2581 tttgtacata ttggaatatg tgttaactta tgccccgcat cccaactcac acggaagcac
2641 gggtcttgtc tcagtctctt cgctgcattt ggaaagcagt ctcctctcgg gccagcgccg
2701 ggctgaggtg tccagaggcg gcggcagctg gcagtgccct catcccccaa gtgtccagcc
2761 tggcacttcc cattcaggcc acctgctttg ggtcaacagt tcctttgcca gcagcatctc
2821 ctaaattgta aggactctgt ccaccggggc cctcccaggg ctgtgaggac ggaaacaggc
2881 agggagtgga gctaacagct tagtcaccag gacccccaga cctgcaaacg tcccctcctg
2941 gaaggggaag ccaggaacag cagaactgcc cagaaaacaa ggctgtgaac ttttcgggaa
3001 ctggaactgt ttaacttgaa cccaggattg tttaaagctt tatttattta tagcttcttc
3061 ttaaaaaaaa gtgttgaaga aattttttgg ttattcatac aaaaaaatga gttgatgatg
3121 gaaaagcaag tcataatcat ctaattgttt ttgtctaggt cgagaatgaa tgttagctga
3181 tgaaataaac cctgacaagg aaaaaaaaaa aaaaaaaaaa
//