LOCUS       BC001187                1309 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens COP9 constitutive photomorphogenic homolog subunit 5
            (Arabidopsis), mRNA (cDNA clone MGC:3149 IMAGE:3354130), complete
            cds.
ACCESSION   BC001187
VERSION     BC001187.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 6 Row: h Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis.
FEATURES             Location/Qualifiers
     source          1..1309
                     /db_xref="H-InvDB:HIT000030207"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:3149 IMAGE:3354130"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1309
                     /gene="COPS5"
                     /gene_synonym="CSN5"
                     /gene_synonym="JAB1"
                     /gene_synonym="MGC3149"
                     /gene_synonym="MOV-34"
                     /gene_synonym="SGN5"
                     /db_xref="GeneID:10987"
                     /db_xref="HGNC:HGNC:2240"
                     /db_xref="MIM:604850"
     CDS             136..1140
                     /gene="COPS5"
                     /gene_synonym="CSN5"
                     /gene_synonym="JAB1"
                     /gene_synonym="MGC3149"
                     /gene_synonym="MOV-34"
                     /gene_synonym="SGN5"
                     /codon_start=1
                     /product="COP9 constitutive photomorphogenic homolog
                     subunit 5 (Arabidopsis)"
                     /protein_id="AAH01187.1"
                     /db_xref="GeneID:10987"
                     /db_xref="HGNC:HGNC:2240"
                     /db_xref="MIM:604850"
                     /translation="MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKP
                     WTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEG
                     TETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQ
                     FQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHC
                     KQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQS
                     EAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS
                     "
BASE COUNT          413 a          259 c          310 g          327 t
ORIGIN      
        1 gtgtcatggc tgccccaaga gtctaggtaa gagtttgttc ccgtggtgcg gagggtcaag
       61 gcccacaccc ggaaacctag cgaggtaaag ttgcgtcttg gttgtagaga cgacaacttc
      121 tccgcttcct cggcgatggc ggcgtccggg agcggtatgg cccagaaaac ctgggaactg
      181 gccaacaaca tgcaggaagc tcagagtatc gatgaaatct acaaatacga caagaaacag
      241 cagcaagaaa tcctggcggc gaagccctgg actaaggatc accattactt taagtactgc
      301 aaaatctcag cattggctct gctgaagatg gtgatgcatg ccagatcggg aggcaacttg
      361 gaagtgatgg gtctgatgct aggaaaggtg gatggtgaaa ccatgatcat tatggacagt
      421 tttgctttgc ctgtggaggg cactgaaacc cgagtaaatg ctcaggctgc tgcatatgaa
      481 tacatggctg catacataga aaatgcaaaa caggttggcc gccttgaaaa tgcaatcggg
      541 tggtatcata gccaccctgg ctatggctgc tggctttctg ggattgatgt tagtactcag
      601 atgctcaatc agcagttcca ggaaccattt gtagcagtgg tgattgatcc aacaagaaca
      661 atatccgcag ggaaagtgaa tcttggcgcc tttaggacat acccaaaggg ctacaaacct
      721 cctgatgaag gaccttctga gtaccagact attccactta ataaaataga agattttggt
      781 gtacactgca aacaatatta tgccttagaa gtctcatatt tcaaatcctc tttggatcgc
      841 aaattgcttg agctgttgtg gaataaatac tgggtgaata cgttgagttc ttctagcttg
      901 cttactaatg cagactatac cactggtcag gtctttgatt tgtctgaaaa gttagagcag
      961 tcagaagccc agctgggacg agggagtttc atgttgggtt tagaaacgca tgaccgaaaa
     1021 tcagaagaca aacttgccaa agctacaaga gacagctgta aaactaccat agaagctatc
     1081 catggattga tgtctcaggt tattaaggat aaactgttta atcaaattaa catctcttaa
     1141 acagtctctg agaagtactt tacctgaaag acagtatgag aaaaatattc aagtaacact
     1201 ttaaaaccag ttacccaaaa tctgattaga agtataaggt gctctgaagt gtcctaaata
     1261 ttaatatcct gtaataaagc tctttaaaat gaaaaaaaaa aaaaaaaaa
//