LOCUS BC001165 1646 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens N-ethylmaleimide-sensitive factor attachment protein,
alpha, mRNA (cDNA clone MGC:1700 IMAGE:3533668), complete cds.
ACCESSION BC001165
VERSION BC001165.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1646)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1646)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47933378.
FEATURES Location/Qualifiers
source 1..1646
/db_xref="H-InvDB:HIT000030188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1700 IMAGE:3533668"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1646
/gene="NAPA"
/gene_synonym="SNAPA"
/db_xref="GeneID:8775"
/db_xref="HGNC:HGNC:7641"
/db_xref="MIM:603215"
CDS 91..978
/gene="NAPA"
/gene_synonym="SNAPA"
/codon_start=1
/product="N-ethylmaleimide-sensitive factor attachment
protein, alpha"
/protein_id="AAH01165.1"
/db_xref="GeneID:8775"
/db_xref="HGNC:HGNC:7641"
/db_xref="MIM:603215"
/translation="MDNSGKEAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEI
YARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAIN
CLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSS
ANKCLLKVAGYAALLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDM
LNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWL
TTMLLRIKKTIQGDEEDLR"
BASE COUNT 376 a 501 c 436 g 333 t
ORIGIN
1 gttttaccga tctgtgttcc gcggcccggc cgcggctgag tcttcccagg gtcagggtca
61 ggcgctttgc tgagtccctt tgtggccgcc atggacaatt ccgggaagga agcggaggcg
121 atggcgctgt tggccgaggc ggagcgcaaa gtgaagaact cgcagtcctt cttctctggc
181 ctctttggag gctcatccaa aatagaggaa gcatgcgaaa tctacgccag agcagcaaac
241 atgttcaaaa tggccaaaaa ctggagtgct gctggaaacg cgttctgcca ggctgcacag
301 ctgcacctgc agctccagag caagcacgac gcagccacct gctttgtgga cgctggcaac
361 gcattcaaga aagccgaccc ccaagaggcc attaactgtt tgatgcgagc aatcgagatc
421 tacacagaca tgggccgatt cacgattgcg gccaagcacc acatctccat tgctgagatc
481 tatgagacag agttggtgga catcgagaag gccattgccc actacgagca gtctgcagac
541 tactacaaag gcgaggagtc caacagctca gccaacaagt gtctgctgaa ggtggctggt
601 tacgctgcgc tgctggagca gtatcagaag gccattgaca tctacgaaca ggtggggacc
661 aatgccatgg acagccccct cctcaagtac agcgccaaag actacttctt caaggcggcc
721 ctctgccact tctgcatcga catgctcaac gccaagctgg ctgtccaaaa gtatgaggag
781 ctgttcccag ctttctctga ttcccgggaa tgcaagttga tgaaaaaatt gctagaggcc
841 cacgaggagc agaatgtgga cagctacacc gagtcggtga aggaatacga ctccatctcc
901 cggctggacc agtggctcac caccatgctg ctgcgcatca agaagaccat ccagggcgat
961 gaggaggacc tgcgctaagc cccacccagc cccccagtgc ccgtcttcct gtcccatctg
1021 ctcagagaga ggtggggccg agacttgctg gagagcttcc ctcctttccc atctggggag
1081 tcccgcgggc cacagtgggc aggtggcacc gggggtcagc atgcaggggc gccagaggcc
1141 caggctgctg gccggacagt caccctctgt tctcgctaca tcccttgccc cctgtccatt
1201 tatttaagcc cccataggtg cccttcaccc ccaaaaccag ctgtacagaa tctttgatac
1261 agacctattt gctaggggtg ctgccgggga tttggggtca gcatctggcc ccctatctcc
1321 tgaccagctg agtcatgagg ccggtttctc tctctctccc acttttgtcc cccagccaag
1381 ctctaaagca catgtagccg ctgagacctg ctgtttctgc tgggggcagg ctcctcttcc
1441 cccagccccg ggagcctccc ccagcttcct gcagccccga cctctcaggt tagaccctgg
1501 gccctggagc ttaggggatt ctccccaccc cagccccaca cctgctcctt ccctaatgct
1561 ttgaggtttt cttggttgga agctgcagct ggcccaagaa agaaaataaa aaacaacact
1621 tttgcatgaa aaaaaaaaaa aaaaaa
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