LOCUS BC001142 2152 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens copine I, mRNA (cDNA clone MGC:1142 IMAGE:3502122),
complete cds.
ACCESSION BC001142
VERSION BC001142.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2152)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2152)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23397697.
FEATURES Location/Qualifiers
source 1..2152
/db_xref="H-InvDB:HIT000030170"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1142 IMAGE:3502122"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2152
/gene="CPNE1"
/gene_synonym="COPN1"
/gene_synonym="CPN1"
/gene_synonym="MGC1142"
/db_xref="GeneID:8904"
/db_xref="HGNC:HGNC:2314"
/db_xref="MIM:604205"
CDS 324..1937
/gene="CPNE1"
/gene_synonym="COPN1"
/gene_synonym="CPN1"
/gene_synonym="MGC1142"
/codon_start=1
/product="copine I"
/protein_id="AAH01142.1"
/db_xref="GeneID:8904"
/db_xref="HGNC:HGNC:2314"
/db_xref="MIM:604205"
/translation="MAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAEL
GRTERVRNCSSPEFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLG
QIVSSQVLTLPLMLKPGKPAGRGTITVSAQELKDNRVVTMEVEARNLDKKDFLGKSDP
FLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSD
GSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLD
YVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDK
LFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFA
PIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASNLPMSVIIVGV
GGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQTVLAEVPTQ
LVSYFRAQGWAPLKPLPPSAKDPAQAPQA"
BASE COUNT 457 a 587 c 592 g 516 t
ORIGIN
1 cgaaggaggt ggtggctgcg ttgggctccg ggaagccgtt cgggctgggg ctgtcggccg
61 cggggcggag gcactcgcgc ggggggtaat tcggggtctg ggttctggtg ccgcgcagct
121 ttccccggat tgacttggcc tctacttctt gttaaggaaa ttcatctctt gttttatcag
181 gtgtgtgtgg tttcagcgca gcatggctgt ggtcatccgt ttgcaaggtc tcccaattgt
241 ggcggggacc atggacattc gccacttctt ctctggattg accattcctg atgggggcgt
301 gcatattgta gggggtgaac tggatggccc actgcgtgac cttggttcag ctgtccattt
361 cctgtgacca tctcattgac aaggacatcg gctccaagtc tgacccactc tgcgtccttt
421 tacaggatgt gggagggggc agctgggctg agcttggccg gactgaacgg gtgcggaact
481 gctcaagccc tgagttctcc aagactctac agcttgagta ccgctttgag acagtccaga
541 agctacgctt tggaatctat gacatagaca acaagacgcc agagctgagg gatgatgact
601 tcctaggggg tgctgagtgt tccctaggac agattgtgtc cagccaggta ctgactctcc
661 ccttgatgct gaagcctgga aaacctgctg ggcgggggac catcacggtc tcagctcagg
721 aattaaagga caatcgtgta gtaaccatgg aggtagaggc cagaaaccta gataagaagg
781 acttcctggg aaaatcagat ccatttctgg agttcttccg ccagggtgat gggaaatggc
841 acctggtgta cagatctgag gtcatcaaga acaacctgaa ccctacatgg aagcgtttct
901 cagtccccgt tcagcatttc tgtggtggga accccagcac acccatccag gtgcaatgct
961 ccgattatga cagtgacggg tcacatgatc tcatcggtac cttccacacc agcttggccc
1021 agctgcaggc agtcccggct gagtttgaat gcatccaccc tgagaagcag cagaaaaaga
1081 aaagctacaa gaactctgga actatccgtg tcaagatttg tcgggtagaa acagagtact
1141 cctttctgga ctatgtgatg ggaggctgtc agatcaactt cactgtgggc gtggacttca
1201 ctggctccaa tggagacccc tcctcacctg actccctaca ctacctgagt ccaacagggg
1261 tcaatgagta cctgatggca ctgtggagtg tgggcagcgt ggttcaggac tatgactcag
1321 acaagctgtt ccctgcattt ggatttgggg cccaggttcc ccctgactgg caggtctcgc
1381 atgaatttgc cttgaatttc aaccccagta acccctactg tgcaggcatc cagggcattg
1441 tggatgccta ccgccaagcc ctgccccaag ttcgcctcta tggccctacc aactttgcac
1501 ccatcatcaa ccatgtggcc aggtttgcag cccaggctgc acatcagggg actgcctcgc
1561 aatacttcat gctgttgctg ctgactgatg gtgctgtgac ggatgtggaa gccacacgtg
1621 aggctgtggt gcgtgcctcg aacctgccca tgtcagtgat cattgtgggt gtgggtggtg
1681 ctgactttga ggccatggag cagctggacg ctgatggtgg acccctgcat acacgttctg
1741 ggcaggctgc tgcccgcgac attgtgcagt ttgtacccta ccgccggttc cagaatgccc
1801 ctcgggaggc attggcacag accgtgctcg cagaagtgcc cacacaactg gtctcatact
1861 tcagggccca gggttgggcc ccgctcaagc cacttccacc ctcagccaag gatcctgcac
1921 aggcccccca ggcctaggtt cccttggagg ctgtggcaag tcctcaatcc tgtgtcccag
1981 aggtccctct gggccacaac ccaacccttc tcactctcct cagtgctagc actttgtatt
2041 ttttgatact tttatacttg tttctgcttt tgctgctctt gatcccacct ttgctcctga
2101 caaccctcat tcaataaaga ccagtgaaga ccaaaaaaaa aaaaaaaaaa aa
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