LOCUS BC001125 894 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens peptidylprolyl isomerase B (cyclophilin B), mRNA (cDNA clone MGC:2224 IMAGE:2966791), complete cds. ACCESSION BC001125 VERSION BC001125.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 894) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 894) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 8, 2003 this sequence version replaced BC001125.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: m Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 44890060. FEATURES Location/Qualifiers source 1..894 /db_xref="H-InvDB:HIT000030155" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2224 IMAGE:2966791" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..894 /gene="PPIB" /gene_synonym="CYP-S1" /gene_synonym="CYPB" /gene_synonym="MGC14109" /gene_synonym="MGC2224" /gene_synonym="SCYLP" /db_xref="GeneID:5479" /db_xref="HGNC:HGNC:9255" /db_xref="MIM:123841" CDS 19..669 /gene="PPIB" /gene_synonym="CYP-S1" /gene_synonym="CYPB" /gene_synonym="MGC14109" /gene_synonym="MGC2224" /gene_synonym="SCYLP" /codon_start=1 /product="peptidylprolyl isomerase B (cyclophilin B)" /protein_id="AAH01125.1" /db_xref="GeneID:5479" /db_xref="HGNC:HGNC:9255" /db_xref="MIM:123841" /translation="MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTV KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMI QGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTA WLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE" BASE COUNT 236 a 222 c 247 g 189 t ORIGIN 1 tttcgcctcc gcctgtggat gctgcgcctc tccgaacgca acatgaaggt gctccttgcc 61 gccgccctca tcgcggggtc cgtcttcttc ctgctgctgc cgggaccttc tgcggccgat 121 gagaagaaga aggggcccaa agtcaccgtc aaggtgtatt ttgacctacg aattggagat 181 gaagatgtag gccgggtgat ctttggtctc ttcggaaaga ctgttccaaa aacagtggat 241 aattttgtgg ccttagctac aggagagaaa ggatttggct acaaaaacag caaattccat 301 cgtgtaatca aggacttcat gatccagggc ggagacttca ccaggggaga tggcacagga 361 ggaaagagca tctacggtga gcgcttcccc gatgagaact tcaaactgaa gcactacggg 421 cctggctggg tgagcatggc caacgcaggc aaagacacca acggctccca gttcttcatc 481 acgacagtca agacagcctg gctagatggc aagcatgtgg tgtttggcaa agttctagag 541 ggcatggagg tggtgcggaa ggtggagagc accaagacag acagccggga taaacccctg 601 aaggatgtga tcatcgcaga ctgcggcaag atcgaggtgg agaagccctt tgccatcgcc 661 aaggagtagg gcacagggac atctttcttt gagtgaccgt ctgtgcaggc cctgtagtcc 721 gccacagggc tctgagctgc actggccccg gtgctggcat ctggtggagc ggacccactc 781 ccctcacatt ccacaggccc atggactcac ttttgtaaca aactcctacc aacactgacc 841 aataaaaaaa aatgtgggtt tttttttttt taatataaaa aaaaaaaaaa aaaa //