LOCUS BC001109 990 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cellular retinoic acid binding protein 2, mRNA (cDNA
clone MGC:1183 IMAGE:2988143), complete cds.
ACCESSION BC001109
VERSION BC001109.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001109.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6382069.
FEATURES Location/Qualifiers
source 1..990
/db_xref="H-InvDB:HIT000030141"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1183 IMAGE:2988143"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..990
/gene="CRABP2"
/gene_synonym="CRABP-II"
/gene_synonym="RBP6"
/db_xref="GeneID:1382"
/db_xref="HGNC:HGNC:2339"
/db_xref="MIM:180231"
CDS 124..540
/gene="CRABP2"
/gene_synonym="CRABP-II"
/gene_synonym="RBP6"
/codon_start=1
/product="cellular retinoic acid binding protein 2"
/protein_id="AAH01109.1"
/db_xref="GeneID:1382"
/db_xref="HGNC:HGNC:2339"
/db_xref="MIM:180231"
/translation="MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEI
KQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLK
GEGPKTSWTRELTNDGELILTMTADDVVCTRVYVRE"
BASE COUNT 262 a 275 c 250 g 203 t
ORIGIN
1 ccctggactt gtcttggttc cagaacctga cgacccggcg acggcgacgt ctcttttgac
61 taaaagacag tgtccagtgc tccagcctag gagtctacgg ggaccgcctc ccgcgccgcc
121 accatgccca acttctctgg caactggaaa atcatccgat cggaaaactt cgaggaattg
181 ctcaaagtgc tgggggtgaa tgtgatgctg aggaagattg ctgtggctgc agcgtccaag
241 ccagcagtgg agatcaaaca ggagggagac actttctaca tcaaaacctc caccaccgtg
301 cgcaccacag agattaactt caaggttggg gaggagtttg aggagcagac tgtggatggg
361 aggccctgta agagcctggt gaaatgggag agtgagaata aaatggtctg tgagcagaag
421 ctcctgaagg gagagggccc caagacctcg tggaccagag aactgaccaa cgatggggaa
481 ctgatcctga ccatgacggc ggatgacgtt gtgtgcacca gggtctacgt ccgagagtga
541 gtggccacag gtagaaccgc ggccgaagcc caccactggc catgctcacc gccctgcttc
601 actgccccct ccgtcccacc ccctccttct aggatagcgc tccccttacc ccagtcactt
661 ctgggggtca ctgggatgcc tcttgcaggg tcttgctttc tttgacctct tctctcctcc
721 cctacaccaa caaagaggaa tggctgcaag agcccagatc acccattccg ggttcactcc
781 ccgcctcccc aagtcagcag tcctagcccc aaaccagccc agagcagggt ctctctaaag
841 gggacttgag ggcctgagca ggaaagactg gccctctagc ttctaccctt tgtccctgta
901 gcctatacag tttagaatat ttatttgtta attttattaa aatgctttaa aaaaataaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//