LOCUS BC001104 2721 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nucleoporin like 1, mRNA (cDNA clone MGC:751
IMAGE:3504343), complete cds.
ACCESSION BC001104
VERSION BC001104.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001104.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: g Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255185.
FEATURES Location/Qualifiers
source 1..2721
/db_xref="H-InvDB:HIT000030136"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:751 IMAGE:3504343"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2721
/gene="NUPL1"
/gene_synonym="KIAA0410"
/gene_synonym="PRO2463"
/db_xref="GeneID:9818"
/db_xref="HGNC:HGNC:20261"
/db_xref="MIM:607615"
CDS 119..1918
/gene="NUPL1"
/gene_synonym="KIAA0410"
/gene_synonym="PRO2463"
/codon_start=1
/product="nucleoporin like 1"
/protein_id="AAH01104.1"
/db_xref="GeneID:9818"
/db_xref="HGNC:HGNC:20261"
/db_xref="MIM:607615"
/translation="MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSVGLNF
GNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTS
AATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA
TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGG
IDFSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMS
SKAMLKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPG
LQHEYAAPADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKI
YQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTT
GPTPFSTMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSS
NLGGFGTSSGFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGL
TFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR"
BASE COUNT 788 a 613 c 621 g 699 t
ORIGIN
1 gttcccgcca ggtccgtgcc gggcgagaga gatgctgccc ggcccgcctc ggctttgagg
61 cgagagaagt gtcccagacc catttcgcct tgctgacggc gtcgagccct ggccagacat
121 gtccacaggg ttctccttcg ggtccgggac tctgggctcc accaccgtgg ccgccggcgg
181 gaccagcaca ggcggcgttt tctccttcgg aacgggagcg tctagcaacc cttctgtggg
241 gctcaatttt ggaaatcttg gaagtacttc aactccagca actacatctg ctccttcaag
301 tggttttgga accgggctct ttggatctaa acctgccact gggttcactc taggaggaac
361 aaatacagga atagcaacaa ctataactac aggattaact ctgggaacgc cagccactac
421 atctgcagct acaacaggct tcagtttagg attcaataaa cctgcagcat ctgccacacc
481 atttgctcta cctattacct ctacctcagc tagcggtctg actctttcgt ctgctctgac
541 atcaactcca gcagcatcca caggatttac tctaaataat ttgggtggga caacagccac
601 aactacaact gcatcaacag gcctctcttt agggggagcc ttagctggtt tgggaggttc
661 acttttccag agtacaaaca caggaacatc aggacttgga cagaatgctt tagggttgac
721 tttgggaact acagcagcta cttcaactgc aggcaatgaa ggccttggtg gtatagattt
781 cagtagctcc tcagataaaa agagtgataa aacgggaaca agaccagagg atagtaaagc
841 tctgaaggat gaaaatctac ctcctgtcat ctgccaggat gttgaaaatc tccagaaatt
901 tgtgaaggag cagaaacaag ttcaagaaga aattagtaga atgtcttcaa aagcaatgct
961 taaggtacaa gaagatatta aagctctgaa gcagctcctg tcgttggctg ccaatggaat
1021 acagagaaac actctcaaca ttgacaaatt gaaaatagaa actgctcagg agttgaagaa
1081 tgctgaaata gctttaagaa cccagaagac accacctgga cttcaacatg aatatgcagc
1141 tcctgctgac tacttcagaa tcttggttca gcaatttgag gtacagcttc agcagtacag
1201 gcagcagatt gaagaactag aaaaccatct tgccactcaa gcaaataatt cacatataac
1261 ccctcaagat ttgtcaatgg ctatgcagaa aatttatcaa acatttgtag ctttagcggc
1321 acaacttcag tctattcatg aaaatgtaaa ggttctgaaa gaacagtacc ttggctacag
1381 gaaaatgttc ttgggagatg ctgttgatgt gtttgaaaca aggcgagcag aagccaagaa
1441 gtggcagaac acacccagag ttactactgg acccactcct ttcagcacca tgccaaacgc
1501 agcagccgtt gccatggctg caacacttac acagcagcaa cagcctgcta cagggccaca
1561 gccatctctg ggagttagtt ttggaacgcc attcggctca ggtattggca ctggcttgca
1621 atcaagtggc ttaggttctt caaaccttgg aggatttgga actagctctg gttttggatg
1681 cagcaccaca ggggcctcca catttggatt tggaacaaca aataaaccct caggaagtct
1741 tagtgcaggc tttggcagct caagtacatc tgggtttaac ttcagcaatc ctggcatcac
1801 ggcatcagct ggtttgactt ttggggtgtc caatcctgcc tctgcaggtt ttggaacagg
1861 aggacaactc cttcagttga agaaacctcc agctggaaac aaaagaggaa aaagataaac
1921 atgggttgat gtgttgagag aatccatagc agcaccgttc attctatgag tctatttttc
1981 taatgatgca gtaattaaat tgcatcccag gagatttata aagttttgat atttttccct
2041 actctggaat ttgaactttc ttcatgtttg ccatactgaa catctttttt cttgtggaat
2101 ttaaagtcca gctgtgtttt ctttttaatt tgattctcag tgtaagaaat gttctgatta
2161 catcactgat tggtaatggt tagaaaccat taacctaaaa cttactattt aacctagtgt
2221 ttttgttgat gaggtttaca ttatgtgaat acatgcacat ttgtttctta tacaggtggt
2281 gtgaactcta gggcctatac tagaatcaat ttgttccttg ttaaaggcct tttgaattat
2341 actgcagggc atcttgtgaa tatgtatgta aatatataca gaataataca cacagttgtg
2401 tgtgcatata aaatacatat ttacgccagg cgtggtggct cacgcctgta atcccagcac
2461 tttgggaggc cgaggcaggc ggatcacctg aggtcaggag tttgagacca gcctgacatg
2521 gtgaaacccc atctctacga aaaatacaaa aattagctgg gcatagtggc gggtacctat
2581 aatcccagct actcgggagg ctgaggcacg agaatcactt gaagccggga ggtgggggtt
2641 gcagtgagcc gagatcacac cactgcactc cagcctgggc aacaagagca aaactccgtc
2701 tcaaaaaaaa aaaaaaaaaa a
//