LOCUS BC001060 2698 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens paired box 8, mRNA (cDNA clone MGC:2141 IMAGE:2963877), complete cds. ACCESSION BC001060 VERSION BC001060.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2698) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2698) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC001060.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 2 Row: b Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37577112. FEATURES Location/Qualifiers source 1..2698 /db_xref="H-InvDB:HIT000030110" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2141 IMAGE:2963877" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2698 /gene="PAX8" /db_xref="GeneID:7849" /db_xref="HGNC:HGNC:8622" /db_xref="MIM:167415" CDS 158..1510 /gene="PAX8" /codon_start=1 /product="paired box 8" /protein_id="AAH01060.1" /db_xref="GeneID:7849" /db_xref="HGNC:HGNC:8622" /db_xref="MIM:167415" /translation="MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRP CDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTM FAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLI PSSAVTPPESPQSDSLGSTYSINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSG PRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKA TLTPSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQ VGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIA GMVAGSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPYYYSSTSRPSAPPTTATAFDHL " BASE COUNT 606 a 901 c 691 g 500 t ORIGIN 1 cttcagaagg aggagagaca ccgggcccag ggcaccctcg cgggcggacc caagcagtga 61 gggcctgcag ccggccggcc agggcagcgg caggcgcggc ccggacctac gggaggaagc 121 cccgagccct cggcgggctg cgagcgactc cccggcgatg cctcacaact ccatcagatc 181 tggccatgga gggctgaacc agctgggagg ggcctttgtg aatggcagac ctctgccgga 241 agtggtccgc cagcgcatcg tagacctggc ccaccagggt gtaaggccct gcgacatctc 301 tcgccagctc cgcgtcagcc atggctgcgt cagcaagatc cttggcaggt actacgagac 361 tggcagcatc cggcctggag tgataggggg ctccaagccc aaggtggcca cccccaaggt 421 ggtggagaag attggggact acaaacgcca gaaccctacc atgtttgcct gggagatccg 481 agaccggctc ctggctgagg gcgtctgtga caatgacact gtgcccagtg tcagctccat 541 taatagaatc atccggacca aagtgcagca accattcaac ctccctatgg acagctgcgt 601 ggccaccaag tccctgagtc ccggacacac gctgatcccc agctcagctg taactccccc 661 ggagtcaccc cagtcggatt ccctgggctc cacctactcc atcaatgggc tcctgggcat 721 cgctcagcct ggcagcgaca agaggaaaat ggatgacagt gatcaggata gctgccgact 781 aagcattgac tcacagagca gcagcagcgg accccgaaag caccttcgca cggatgcctt 841 cagccagcac cacctcgagc cgctcgagtg cccatttgag cggcagcact acccagaggc 901 ctatgcctcc cccagccaca ccaaaggcga gcagggcctc tacccgctgc ccttgctcaa 961 cagcaccctg gacgacggga aggccaccct gaccccttcc aacacgccac tggggcgcaa 1021 cctctcgact caccagacct accccgtggt ggcagatcct cactcaccct tcgccataaa 1081 gcaggaaacc cccgaggtgt ccagttctag ctccacccct tcctctttat ctagctccgc 1141 ctttttggat ctgcagcaag tcggctccgg ggtcccgccc ttcaatgcct ttccccatgc 1201 tgcctccgtg tacgggcagt tcacgggcca ggccctcctc tcagggcgag agatggtggg 1261 gcccacgctg cccggatacc caccccacat ccccaccagc ggacagggca gctatgcctc 1321 ctctgccatc gcaggcatgg tggcaggaag tgaatactct ggcaatgcct atggccacac 1381 cccctactcc tcctacagcg aggcctggcg cttccccaac tccagcttgc tgagttcccc 1441 atattattac agttccacat caaggccgag tgcaccgccc accactgcca cggcctttga 1501 ccatctgtag ttgccatggg gacagtggga gcgactgagc aacaggagga ctcagcctgg 1561 gacaggcccc agagagtcac acaaaggaat ctttatttat tacatgaaaa ataaccacaa 1621 gtccagcatt gcggcacact ccctgtgtgg ttaatttaat gaaccatgaa agacaggatg 1681 accttggaca aggccaaact gtcctccaag actccttaat gaggggcagg agtcccaggg 1741 aaagagaacc atgccatgct gaaaaagaca aaattgaaga agaaatgtag cccccagccg 1801 gtacccacca aaggagagaa gaagcaatag ccgaggaact tggggggatg gcgaatggtt 1861 cctgcccggg cccaaggggt gcacagggca cctccatggc tccattatta acacaactct 1921 agcaattatg gaccataagc acttccctcc agcccacaag tcacagcctg gtgccgaggc 1981 tctcctcacc agccacccag ggagtcacct ccctcagcct cccgcctgcc ccacacggag 2041 gctctggctg tcctctttct ccactccatt tgcttggctc tttctacacc tccctcttgg 2101 gcatgggctg agggctggag cgagtccctc agaaattcca ccaggctgtc agctgacctc 2161 ttttgcctgc tgctgtgaag gtatagcacc accccaggtc ctcctgcagt gcggcatccc 2221 cttggcagct gccgtcagcc aggccagccc cagggagctt aaaacagaca ttccacaggg 2281 cctgggcccc tgggaggtga ggtgtggtgt gcggcttcac ccagggcaga acaaggcaga 2341 atcgcaggaa acccgcttcc ccttcctgac agctcctgcc aagccaaatg tgcttcctgc 2401 agctcacgcc caccagctac tgaagggacc caaggcaccc cctgaagcca gcgatagagg 2461 gtccctctct gctccccagc agctcctgcc cccaaggcct gactgtatat actgtcaatg 2521 aaactttgtt tgggtcaagc ttccttcttt ctacccccca gactttggcc tctgagtgaa 2581 atgtctctct ttgccctgtg gggcttctct ccttgatgct tctttctttt tttaaagaca 2641 acctgccatt accacatgac tcaataaacc attgctcttc aaaaaaaaaa aaaaaaaa //