LOCUS BC001035 1151 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:3139770), complete cds. ACCESSION BC001035 VERSION BC001035.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1151) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1151) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001035.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: c Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47519538 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1151 /db_xref="H-InvDB:HIT000030087" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3139770" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1151 /gene="RTN4" /gene_synonym="ASY" /gene_synonym="Nbla00271" /gene_synonym="Nbla10545" /gene_synonym="NI220/250" /gene_synonym="NOGO" /gene_synonym="NOGO-A" /gene_synonym="NSP" /gene_synonym="NSP-CL" /gene_synonym="RTN-X" /gene_synonym="RTN4-A" /gene_synonym="RTN4-B1" /gene_synonym="RTN4-B2" /gene_synonym="RTN4-C" /db_xref="GeneID:57142" /db_xref="HGNC:HGNC:14085" /db_xref="MIM:604475" CDS 186..785 /gene="RTN4" /gene_synonym="ASY" /gene_synonym="Nbla00271" /gene_synonym="Nbla10545" /gene_synonym="NI220/250" /gene_synonym="NOGO" /gene_synonym="NOGO-A" /gene_synonym="NSP" /gene_synonym="NSP-CL" /gene_synonym="RTN-X" /gene_synonym="RTN4-A" /gene_synonym="RTN4-B1" /gene_synonym="RTN4-B2" /gene_synonym="RTN4-C" /codon_start=1 /product="reticulon 4" /protein_id="AAH01035.1" /db_xref="GeneID:57142" /db_xref="HGNC:HGNC:14085" /db_xref="MIM:604475" /translation="MDGQKKNWKDKVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIV SVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSA LGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPV IYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE" BASE COUNT 324 a 204 c 276 g 347 t ORIGIN 1 ctgttccaca cccagaagac gtcaggtgac ttcagtcctg ctgcagttgt gcagcagagg 61 agactgcaga cttcggttga ggaaacgggt atttcatgtc tcagggagta ggtttgtgca 121 gttacagctt ttctgttggt atgcataatt aataattgga gctgcaaagc agatcgtgac 181 aagagatgga cggtcagaag aaaaattgga aggacaaggt tgttgacctc ctgtactgga 241 gagacattaa gaagactgga gtggtgtttg gtgccagcct attcctgctg ctttcattga 301 cagtattcag cattgtgagc gtaacagcct acattgcctt ggccctgctc tctgtgacca 361 tcagctttag gatatacaag ggtgtgatcc aagctatcca gaaatcagat gaaggccacc 421 cattcagggc atatctggaa tctgaagttg ctatatctga ggagttggtt cagaagtaca 481 gtaattctgc tcttggtcat gtgaactgca cgataaagga actcaggcgc ctcttcttag 541 ttgatgattt agttgattct ctgaagtttg cagtgttgat gtgggtattt acctatgttg 601 gtgccttgtt taatggtctg acactactga ttttggctct catttcactc ttcagtgttc 661 ctgttattta tgaacggcat caggcacaga tagatcatta tctaggactt gcaaataaga 721 atgttaaaga tgctatggct aaaatccaag caaaaatccc tggattgaag cgcaaagctg 781 aatgaaaacg cccaaaataa ttagtaggag ttcatcttta aaggggatat tcatttgatt 841 atacggggga gggtcaggga agaacgaacc ttgacgttgc agtgcagttt cacagatcgt 901 tgttagatct ttatttttag ccatgcactg ttgtgaggaa aaattacctg tcttgactgc 961 catgtgttca tcatcttaag tattgtaagc tgctatgtat ggatttaaac cgtaatcata 1021 tctttttcct atctatctga ggcactggtg gaataaaaaa cctgtatatt ttactttgtt 1081 gcagatagtc ttgccgcatc ttggcaagtt gcagagatgg tggagctaga aaaaaaaaaa 1141 aaaaaaaaaa a //