LOCUS BC001001 1052 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens vacuolar protein sorting 8 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:3048733), partial cds. ACCESSION BC001001 VERSION BC001001.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1052) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1052) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Feb 14, 2001 this sequence version replaced BC001001.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: h Column: 19. FEATURES Location/Qualifiers source 1..1052 /db_xref="H-InvDB:HIT000030059" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3048733" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1052 /gene="VPS8" /db_xref="GeneID:23355" /db_xref="HGNC:HGNC:29122" CDS <1..446 /gene="VPS8" /codon_start=3 /product="VPS8 protein" /protein_id="AAH01001.2" /db_xref="GeneID:23355" /db_xref="HGNC:HGNC:29122" /translation="HLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSENSSEI KKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRLALL TELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED" BASE COUNT 294 a 272 c 231 g 255 t ORIGIN 1 gccatttgta tcactcattc tgcctacaaa acaaagaatg cactgtggaa tttgagggcc 61 aaacaagatg gacatgctac aaatgcagtt caagtaacaa agtaggaaaa ctcagtgaaa 121 attcatctga aattaaaaag ggaaggataa ccccatcaca ggtaaaaatg tctccatcgt 181 atcatcagtc caaaggggat cccactgcta aaaagggaac ctcagaacct gttctggatc 241 cacagcaaat ccaagcattt gatcagcttt gccgtctcta ccgaggaagc tccaggctgg 301 ctctcctcac ggaactctcc cagaatcgca gcagcgagag ctataggcca ttcagtggct 361 cgcagagtgc tcctgctttc aacagcatct tccagaatga gaacttccag ctgcagctca 421 ttcctccacc tgtgactgag gattgatgac tccatggagc ctggcccagg agaaccagag 481 atgatcccga ggcagctggg gagaggcccc gcctctggtg ggcttggcct ccaccacctc 541 ccacgcttct gagaagaggt tccaaattgg gcttctgtgc ccagagcgtc cacagcacca 601 ttcccagtgt agactcccag tcttctccac attgctgtca tggcgtcagt tcaccagact 661 cattgatttt gttttgcttg ttaagcaaag gaatgtcaca tacctctgtc cagcttttta 721 ggaaatacat ttcgcctatt gcgacttttt ccatttaccc tgaagcctag aaagtaggtg 781 gaactcacac aaatggcatt ccagagtctg ccatactccg tctcctccag ctgctggata 841 atacagagga acttcaactt ctacagggaa cagtggttgg ccaggctgca gtataactga 901 agcatgcctt ggagagagca gacactgtgg gggccagggc catctccctt taatgtgttc 961 atgttaaaac ctatttgagt gtaagacttg ccctttctaa caataaatgc tccgtgttta 1021 agttctgcag gtctcaaaaa aaaaaaaaaa aa //