LOCUS BC001000 1032 bp mRNA linear HUM 08-MAR-2005
DEFINITION Homo sapiens protein kinase C, eta, mRNA (cDNA clone
IMAGE:3048775), complete cds.
ACCESSION BC001000
VERSION BC001000.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1032)
AUTHORS Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1032)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 14, 2001 this sequence version replaced BC001000.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: f Column: 19
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1032
/db_xref="H-InvDB:HIT000030058"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3048775"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1032
/gene="PRKCH"
/gene_synonym="MGC26269"
/gene_synonym="MGC5363"
/gene_synonym="nPKC-eta"
/gene_synonym="PKC-L"
/gene_synonym="PKCL"
/gene_synonym="PRKCL"
/db_xref="GeneID:5583"
/db_xref="MIM:605437"
CDS 61..186
/gene="PRKCH"
/gene_synonym="MGC26269"
/gene_synonym="MGC5363"
/gene_synonym="nPKC-eta"
/gene_synonym="PKC-L"
/gene_synonym="PKCL"
/gene_synonym="PRKCL"
/codon_start=1
/product="PRKCH protein"
/protein_id="AAH01000.1"
/db_xref="GeneID:5583"
/db_xref="MIM:605437"
/translation="MALEIVDNEMRFYEVYRSTYERLSLWAWDVNRSQKEGKCEE"
BASE COUNT 327 a 193 c 203 g 309 t
ORIGIN
1 gaagaactct gtgaaggatg gaactttcag atatcaacta tttagagtcc agagggagcc
61 atggcactag aaatagttga taatgaaatg agattttatg aagtataccg ctccacctat
121 gagcgtctgt ctctgtgggc ttgggatgtt aacaggagcc aaaaggaggg aaagtgtgaa
181 gaataaagta gatctgagaa attctgagcc aatcaggctt cttaattcaa gagacaaacc
241 aagacgttct gtcaactgtg ctgtgctctt ctttaagcca atgaacccca attcctggca
301 gtctacaaga agtctcttaa tgctaatgaa gaatttaaag gtctttttaa ggaaatgaag
361 ggctttccaa atagaatgat ttactctgaa gaaacaaaca atggtatctc tgaaactcac
421 aacctaaagc ccaatcttga aaatatgttg tgcaccaaga cgactgcttc agcttcttct
481 cttatcctta ctttctttaa tagatattta ttaaactgtc cagtgaaaag gtgccacaat
541 gcccagtatt gtaaacaaca ggtttgcatt catgaagctt tcattcattc tggagtctac
601 taatttacct gaatggtgtt tgcattctgt gaaatgcctc tccacgttgc atatgtcaca
661 cttttgtctg cacataactc ttttttcaca agaagggtca ctgccacaac agcacagtca
721 gcgggtgaat tacaggtgcc tgctgcctgc ctacctgggt aatctgatct tgtctgtatc
781 gccgtgtgct catcactgaa gaattgcagg ccactcatgt cagtgaccag atttgtggct
841 tataaacatt agcagtttat ttatgtttta agatgcaaag atgtgtgttt gatattcact
901 ttaataatta gaaatggatc ttgtaaacag ggcatatcaa agatgacctt ataatatgta
961 cccgaatata cagttcaaga attttgtctg actggaaata aatgcatttt gtagcaaaaa
1021 aaaaaaaaaa aa
//