LOCUS BC000957 1777 bp mRNA linear HUM 12-OCT-2004
DEFINITION Homo sapiens non imprinted in Prader-Willi/Angelman syndrome 2,
mRNA (cDNA clone IMAGE:3451448), partial cds.
ACCESSION BC000957
VERSION BC000957.3
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1777)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1777)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000957.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: n Column: 24.
FEATURES Location/Qualifiers
source 1..1777
/db_xref="H-InvDB:HIT000085934"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3451448"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1777
/gene="NIPA2"
/gene_synonym="MGC5466"
/db_xref="GeneID:81614"
/db_xref="MIM:608146"
CDS <1..886
/gene="NIPA2"
/gene_synonym="MGC5466"
/codon_start=2
/product="NIPA2 protein"
/protein_id="AAH00957.3"
/db_xref="GeneID:81614"
/db_xref="MIM:608146"
/translation="GAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNL
HGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFV
VGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLI
VCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLS
GFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGI
EQHTGENVSRRNGNLTAF"
BASE COUNT 511 a 333 c 348 g 585 t
ORIGIN
1 gggagctggt gaggtggcca acttcgctgc gtatgcgttt gcaccagcca ctctagtgac
61 tccactagga gctctcagcg tgctagtaag tgccattctt tcttcatact ttctcaatga
121 aagacttaat cttcatggga aaattgggtg tttgctaagt attctaggat ctacagttat
181 ggtcattcat gctccaaagg aagaggagat tgagacttta aatgaaatgt ctcacaagct
241 aggtgatcca ggttttgtgg tctttgcaac ccttgtggtc attgtggcct tgatattaat
301 cttcgtggtg ggtcctcgcc atggacagac aaacattctt gtgtacataa caatctgctc
361 tgtaatcggc gcgttttcag tctcctgtgt gaagggcctg ggcattgcta tcaaggagct
421 gtttgcaggg aagcctgtgc tgcggcatcc cctggcttgg attctgctgc tgagcctcat
481 cgtctgtgtg agcacacaga ttaattacct aaatagggcc ctggatatat tcaacacttc
541 cattgtgact ccaatatatt atgtattctt tacaacatca gttttaactt gttcagctat
601 tctttttaag gagtggcaag atatgcctgt tgacgatgtc attggtactt tgagtggctt
661 ctttacaatc attgtgggga tattcttgtt gcatgccttt aaagacgtca gctttagtct
721 agcaagtctg cctgtgtctt ttcgaaaaga cgagaaagca atgaatggca atctctctaa
781 tatgtatgaa gttcttaata ataatgaaga aagcttaacc tgtggaatcg aacaacacac
841 tggtgaaaat gtctcccgaa gaaatggaaa tctgacagct ttttaagaaa ggtgtaatta
901 aaggttaatc tgtgattgtt atgaagtgaa tttgaatatc atcagaatgt gtctgaaaaa
961 acattgtcct caaataatgt tctttaaagg caatcttttt aaagatttca ctaatttgga
1021 ccaagaaatt acttttcttg tatttaaaca aacaatggta gctcactaaa atgacctcag
1081 cacatgacga tttctattaa cattttattg ttgtagaagt attttacatt ttcatccctt
1141 ctccaaaagc cgaatgcact aatgacagtt ttaagtctat gaaaatgctt tattttttca
1201 ttggtgatga aagtctgaaa tgtgcatttg tcatccccac tccatcaatc cctgaccatg
1261 taaggctttt ttattttaaa aaaacagagt tatcccaata cattatcctg tgatttacct
1321 tacctacaaa agtggctcct gtttgtttga tgatgattgg ttttattttt gaaatattta
1381 ttaagggaaa actaagttac tgaatgaagg aacctctttc ttacaaaaca aaaaaaaagg
1441 gcagaaatca ccccaaggaa cgatttctca ggttgagatg atcaccgtga atccggcttc
1501 ctctgagcat tcgatggcct tagcacctca tcaagccagc acatcctgcc tgctgttgca
1561 gcctggctgg gtttattctt cagttaccct aatcccatga tgcctggaac cttgattacc
1621 gttttacatc agctcttgta cttttcagta tattttcata atgagttata ttgtcattta
1681 gactttgaac agctctggga aatagaagac tagggttgtt tcttaaattt agctcatgtt
1741 ataataaaaa gttgaaatga aaaaaaaaaa aaaaaaa
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