LOCUS BC000949 1719 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens actin-like 6A, mRNA (cDNA clone MGC:5382
IMAGE:3445923), complete cds.
ACCESSION BC000949
VERSION BC000949.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 14, 2001 this sequence version replaced BC000949.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089996.
FEATURES Location/Qualifiers
source 1..1719
/db_xref="H-InvDB:HIT000030023"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5382 IMAGE:3445923"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1719
/gene="ACTL6A"
/gene_synonym="ACTL6"
/gene_synonym="BAF53A"
/gene_synonym="MGC5382"
/db_xref="GeneID:86"
/db_xref="HGNC:HGNC:24124"
/db_xref="MIM:604958"
CDS 138..1301
/gene="ACTL6A"
/gene_synonym="ACTL6"
/gene_synonym="BAF53A"
/gene_synonym="MGC5382"
/codon_start=1
/product="actin-like 6A"
/protein_id="AAH00949.1"
/db_xref="GeneID:86"
/db_xref="HGNC:HGNC:24124"
/db_xref="MIM:604958"
/translation="MVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAIS
PLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHY
NIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFI
TMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQ
DFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLS
GNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSM
RLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP"
BASE COUNT 518 a 312 c 369 g 520 t
ORIGIN
1 gctccggggt gtgtggacgc cgctttgttg cctgagatga agttggagcc cttgtttttg
61 acattggatc ctatactgtg agagctggtt atgctggtga ggactgcccc aaggtggatt
121 ttcctacagc tattggtatg gtggtagaaa gagatgacgg aagcacatta atggaaatag
181 atggcgataa aggcaaacaa ggcggtccca cctactacat agatactaat gctctgcgtg
241 ttccgaggga gaatatggag gccatttcac ctctaaaaaa tgggatggtt gaagactggg
301 atagtttcca agctattttg gatcatacct acaaaatgca tgtcaaatca gaagccagtc
361 tccatcctgt tctcatgtca gaggcaccgt ggaatactag agcaaagaga gagaaactga
421 cagagttaat gtttgaacac tacaacatcc ctgccttctt cctttgcaaa actgcagttt
481 tgacagcatt tgctaatggt cgttctactg ggctgatttt ggacagtgga gccactcata
541 ccactgcaat tccagtccac gatggctatg tccttcaaca aggcattgtg aaatcccctc
601 ttgctggaga ctttattact atgcagtgca gagaactctt ccaagaaatg aatattgaat
661 tggttcctcc atatatgatt gcatcaaaag aagctgttcg tgaaggatct ccagcaaact
721 ggaaaagaaa agagaagttg cctcaggtta cgaggtcttg gcacaattat atgtgtaatt
781 gtgttatcca ggattttcaa gcttcggtac ttcaagtgtc agattcaact tatgatgaac
841 aagtggctgc acagatgcca actgttcatt atgaattccc caatggctac aattgtgatt
901 ttggtgcaga gcggctaaag attccagaag gattatttga cccttccaat gtaaaggggt
961 tatcaggaaa cacaatgtta ggagtcagtc atgttgtcac cacaagtgtt gggatgtgtg
1021 atattgatat cagaccaggt ctctatggca gtgtaatagt ggcaggagga aacacactaa
1081 tacagagttt tactgacagg ttgaatagag agctgtctca gaaaactcct ccaagtatgc
1141 ggttgaaatt gattgcaaat aatacaacag tggaacggag gtttagctca tggattggcg
1201 gctccattct agcctctttg ggtacctttc aacagatgtg gatttccaag caagaatatg
1261 aagaaggagg gaagcagtgt gtagaaagaa aatgcccttg agaaagagtt cccaagcttc
1321 taccttcctt ttgtcacctt acgtttcata gctttagtat actcaggaaa agaatgacca
1381 tcttttgtag aatgtttata catttttgca tatttcaatt tccacttaaa ttttttaaag
1441 ctttaactgg ctctataaat taagtttgtg ctttccttga aatgcactta ttcttattac
1501 aagcatttta taattttgta taaatgtcta ttttctctaa atattttgct ttcagtaaaa
1561 tgctttccaa ctctgtttag tgtattaatt accagtggat tggtagaact gctttttatt
1621 gactagtaaa agttactgcc tatgcttttt accttaggct tacagaatta aataaaaatt
1681 agccattcca gaaatataaa aaaaaaaaaa aaaaaaaaa
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